Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02502 ATggttttctcttctattcCAGTCTATTTAGATCCTCCCAATTGGCAGCAGCAACCAAATCATTATCGTCGTCGTCCAGCAAATGGCAGTGAAAACCCTCAGCTGCTTCCACCGCTACCTCCAGAAACCGCCCAAGTGGGAATCGGTGCGGGTTCAACCAGGCCGGGCTCCATGGCGGATCGTGCCCGGCTAGCGATGATACCACCGCCGGAAGCTGCTCTCAAGTGTCCACGCTGTGAATCCACCAACACTAAATTTTGCTACTTCAACAATTATAACCTCTCTCAACCTCGGCATTTCTGCAAGACATGTCGGCGATACTGGACAAGAGGAGGAGCTCTTAGGAATGTCCCTGTTGGTGGGGGATGCCGTAGgaacaagaaaagcaaaaggagTCGCTCCAAATCTCCGGCAGCCACTGACAAACAAGCTACAAGTGCAATCCCTTCAACTTGTTCAGGCGGCACCCGCACCACTGAGCTAATTGCTCAGTTGCCTCAACCATCTAACTTGCCTTTCATGGCCTCCTCTTTGCACAATATCACTCGCTATGGCCTTGGAAATATGACCCCCAACTTGCCGCAAACACAAGCTGATCATGTGGGCTTTCAAATGGGTAACAATTCAGGTCTATCTGGTGGGGGAGTGGATCACTGGCGGTTGCAGCAATTTCCTTTCCTAAATAGTTTTGAGTCAAGTGCTGGCGCTGGTTCAGGTTCATACCCATTTCAAAGTGAAAGTGTTGAAGAAGCCGCATCGTCTAGTTTGGTTGGAGTTGGAGGGAATTCTAGGGTTACTACTCAGTTGCCACCAGTTAAATTGGAAGATAACAGGGGGTTAAATTCGTCAAGATCACCCCTTGGTATCCCAGAGAATAATCAATACTTTTCATGGACCGATTTATCTGGGCTTGCTTCTTCTTCCACTGGTCATCTCTTGTG 941 0.474 MVFSSIPVYLDPPNWQQQPNHYRRRPANGSENPQLLPPLPPETAQVGIGAGSTRPGSMADRARLAMIPPPEAALKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKRSRSKSPAATDKQATSAIPSTCSGGTRTTELIAQLPQPSNLPFMASSLHNITRYGLGNMTPNLPQTQADHVGFQMGNNSGLSGGGVDHWRLQQFPFLNSFESSAGAGSGSYPFQSESVEEAASSSLVGVGGNSRVTTQLPPVKLEDNRGLNSSRSPLGIPENNQYFSWTDLSGLASSSTGHLL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02502 313 ProSitePatterns Zinc finger Dof-type signature. 76 112 IPR003851 GO:0003677|GO:0006355
Bva07g02502 313 MobiDBLite consensus disorder prediction 138 153 - -
Bva07g02502 313 Pfam Dof domain, zinc finger 73 128 IPR003851 GO:0003677|GO:0006355
Bva07g02502 313 MobiDBLite consensus disorder prediction 254 270 - -
Bva07g02502 313 MobiDBLite consensus disorder prediction 254 286 - -
Bva07g02502 313 MobiDBLite consensus disorder prediction 118 153 - -
Bva07g02502 313 MobiDBLite consensus disorder prediction 14 33 - -
Bva07g02502 313 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 310 - -
Bva07g02502 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 310 IPR045174 GO:0003700|GO:0006355
Bva07g02502 313 ProSiteProfiles Zinc finger Dof-type profile. 74 128 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02502 Bva-Chr7 20043160 20044759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02502 1 307 C2C2-Dof Transcription Factor Family AT2G37590 38.244 2.09e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva07g02502 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02502 - - gmx:100816635 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02502 07 20043160 20044759 Bva07g02502 07 20043160 20044759 ECH
Bva07g02502 07 20043160 20044759 Bva03g01727 03 15528807 15530541 ECH
Bva09g00140 09 658890 660479 Bva07g02502 07 20043160 20044759 PCT