Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02442 ATGGATCCTTCAAGTGGACAACACCAGATGTGTAACCAAACACTGGAGAACATGATAGTTTGCTCGAAAGCGCAGCAGGAGAGAAAGCCAAGGCCTCAGCCAGAACAAGCTCTGAAATGCCCAAGATGTGATTCAACTAACACAAAATTCTGCTACTACAACAATTACAGTCTTTCTCAGCCAAGATATTTCTGCAAGTCGTGCAGGAGATATTGGACCAAAGGTGGAACCTTGAGGAATGTTCCAGTGGGCGGAGGGTGCCGGAAGAACAAAAGGTCATCATCTGCTTCATCAAAGAGGGCTCAAGATCAAACAGCACTCACACACAATACCAACCCACTCACTGGCCTCCCTCCATTATCCTATGACTCCAATGACCTCTCCCTTGCATTATGCAGGCTCCAAAAGCAATCGTGTGGGCAATTGGGGTTTGATGAACATGACCTTTCTGTTTTGGGCAATCCCACAAACATCCATTGTGATATTCTTGGCAACCCAGGAATGAACCCATCATCCACTAACCCTGGATTTTTAGATGCACTTAGAAATGGGTTCCTAGAAAACCAGAATAATCTTCAGAACCTTTACTACGGGTATGGAAACGGGGACATGGAAGAGGTGGATAATGGGAATGCTTGTGGGGTTGGGGTTAGTGGAGAGATGATTATGCCTTATGATCAAGAGATGAGTAGTACTACTGCCACAACTCAAGCAGTGACCATCACTACCATGAAACAAGAATTGTGTAATGCCAGAGaacaaagtgaaaataagGTCTTGTGGGGTTTCCCATGGCAACTCAACGGAGACACAAACATGGGTGAACTTGATTCAGCAAGAGCAAGTTGGAACGGTTTCACATCATCTTGGCATGGCCGTCTTAATAGTCCCCTAATGTA 899 0.4472 MDPSSGQHQMCNQTLENMIVCSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSASSKRAQDQTALTHNTNPLTGLPPLSYDSNDLSLALCRLQKQSCGQLGFDEHDLSVLGNPTNIHCDILGNPGMNPSSTNPGFLDALRNGFLENQNNLQNLYYGYGNGDMEEVDNGNACGVGVSGEMIMPYDQEMSSTTATTQAVTITTMKQELCNAREQSENKVLWGFPWQLNGDTNMGELDSARASWNGFTSSWHGRLNSPLM 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02442 299 MobiDBLite consensus disorder prediction 83 118 - -
Bva07g02442 299 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 7 298 - -
Bva07g02442 299 Pfam Dof domain, zinc finger 36 92 IPR003851 GO:0003677|GO:0006355
Bva07g02442 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 298 IPR045174 GO:0003700|GO:0006355
Bva07g02442 299 MobiDBLite consensus disorder prediction 97 118 - -
Bva07g02442 299 ProSitePatterns Zinc finger Dof-type signature. 40 76 IPR003851 GO:0003677|GO:0006355
Bva07g02442 299 ProSiteProfiles Zinc finger Dof-type profile. 38 92 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02442 Bva-Chr7 19703648 19706159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02442 1 299 C2C2-Dof Transcription Factor Family AT2G28510 38.906 6.01e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva07g02442 zf-Dof 6.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02442 - - tcc:18590106 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02442 07 19703648 19706159 Bva07g02442 07 19703648 19706159 ECH
Bva09g00204 09 1036572 1038336 Bva07g02442 07 19703648 19706159 PCT