Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01708 ATGGGCAGGCCACCAAGTAATGGAGGCCCCGCCTTTCGTTTTACTCAGGCCGagGTTTCCGAAATGGAAGCTATTTTGCAAGAACACAATAATGCAATGCCGGCCCGTGAAGTTCTTACAGGTCTTGCAGAAAAGTTCAGTGAATCACCAGACCGTAAAGGCAAGATTGCAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAACAAGCGTTATGCTATAAGGGCAAAATCAAGTAAAGCTCCTGGAAAGTTAAACATCACCCCTATGCCTCGAGATGATTCAACCCCAGTTAGGAATGTGCCTCAACCAGTGGCTGCCCCAATTCCTGCTACTTCAGTGCCAGTTTCGGGAAAAGGTACTCCTGAAAATTCAGTCACCGAGTTTGAAGCTAAATCTGGAAGGGATGGGGCATGGTATGATGTTGCTACCTTTCTATCCCACAGATATTTGGAGACCAGTGATCCGGAAGTGCTAGTGCGATTTGCTGGTTTTGGACCTGAGGAAGACGAGTgggttaatataaaaaagaatgtgaGACCCCGCTCTCTTCCATGCGAATCATCAGAATGTGTTGCAGTCCTCCCCGGAGACCTCATACTCTGTTTTCAGGAAGGTAAAGAGCAGGCTCTTTATTTTGATGCTCATGTCCTCGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGCCGTTGTAGGTTTTTGGTTCGTTACGATCACGATCAGTCAGAGGAAATTGTGCCGCTAAGGAAGGTTTGTCGCAGGCCCGAAACCGATTACAGATTACAACAACTTCATGCCGTGAATGATGCAGCGCCCATGGATCAACAGAAGACAGTCATGGAGCCAGCAGCAAATCTTCATCCTACGAGGGTTGCTGCTTCTGCCGAAACACTGCAAAAGCAGCAGACTACAAACTTTCCTTTCTCAACGCCAGTTTCACAGTCGCAAGTAAATGTTCCAATCACCCAGCAACCTACGCCTATGACTGTGGATCCAAAAAATGCTGAAACAGCTACTGAGAGTAAACCAGAAAATCCCACGGTTCCCCCATCCAGCAATATTGCAACCAGTATCCCTGTAGTCTCTAGTCAGAACATGGGCGAAGCAAAATA 1115 0.4628 MGRPPSNGGPAFRFTQAEVSEMEAILQEHNNAMPAREVLTGLAEKFSESPDRKGKIAVQMKQVWNWFQNKRYAIRAKSSKAPGKLNITPMPRDDSTPVRNVPQPVAAPIPATSVPVSGKGTPENSVTEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWVNIKKNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAVNDAAPMDQQKTVMEPAANLHPTRVAASAETLQKQQTTNFPFSTPVSQSQVNVPITQQPTPMTVDPKNAETATESKPENPTVPPSSNIATSIPVVSSQNMGEAK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01708 371 CDD homeodomain 13 75 IPR001356 GO:0003677
Bva07g01708 371 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Bva07g01708 371 MobiDBLite consensus disorder prediction 323 371 - -
Bva07g01708 371 Gene3D - 10 84 - -
Bva07g01708 371 SUPERFAMILY Homeodomain-like 4 77 IPR009057 -
Bva07g01708 371 Pfam SAWADEE domain 127 253 IPR032001 GO:0003682
Bva07g01708 371 MobiDBLite consensus disorder prediction 106 125 - -
Bva07g01708 371 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 348 - -
Bva07g01708 371 SMART HOX_1 7 81 IPR001356 GO:0003677
Bva07g01708 371 Gene3D - 186 258 - -
Bva07g01708 371 Gene3D - 124 185 - -
Bva07g01708 371 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 348 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01708 Bva-Chr7 15967563 15972051 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bva07g01708 SAWADEE 4.2e-40 CL0049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01708 07 15967563 15972051 Bva07g01708 07 15967563 15972051 ECH