Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01583 ATGAAGATTCAGTGTAACGTGTGTGAGGCTGCGGAGGCCAAGGTTTTGTGCTGTGCGGACGAGGCGGCGCTGTGTTGGGAATGTGACGAGAAGGTTCATGCAGCTAACAAGCTCGCCAGCAAGCATCAGAGAGTTCCTCTTTCCTCCTCTTCGTCTCAGATACCTAAATGTGATATTTGTCAGGAAGCAGCTGGCTACTTCTTCTGTCTAGAGGACCGCGCTTTACTCTGCAGAAAATGTGACGTTGCAATACACACAGCAAATGCCTATGTGTCTGCTCATCAAAGGTTTCTGCTCACTGGTATAAGAGTAGGCCTTGAAGCTACTGAGCCTGGTGCTTCCTCATCTTCTGTGAAGTCACATTCTGGGGAGAAAATGTCAGATGCCAAATCATCTTCTGTCTCTAGAAAGGCTGCCTCAGTGCCCCAGTCAACTGAATATAATGAAGTGTTACCGATCCATGTTGGAGGGGGTGGGGAGTTTCCACCAAATCAGGTGTCCTATGGTGGTGGTTCTAATACTGAAAACATCCCTCCTTGGCCCATTGATGTATTTCTGGGGTTGAATGAATTCAAtccaaattataattacatggATAATGGATCATCCAAGGCCGACAGTGGTAAGCTTGGTGGCCCTGATTCTCCTGTCTTGAGATCTTGTGAAGAGGAAATGGATGACGATGATGAATGCTTGGGGCGGGTTCCAGATTCATCCTGGACAGTTCCTCAGATCCCTTCCCCTCCGACAGCATCAGGGTTATATTGGCCAAAAGACCATCTGTATTCATCTAACAGTGCTGTGTTTGTTCCAGACATATGCATTTCCCACGTGAGAAGGCCCAACCATGTTCAGACTAACGGTATCTTATCAGAACGGCATAGGCAACTATA 893 0.4658 MKIQCNVCEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSSSSSQIPKCDICQEAAGYFFCLEDRALLCRKCDVAIHTANAYVSAHQRFLLTGIRVGLEATEPGASSSSVKSHSGEKMSDAKSSSVSRKAASVPQSTEYNEVLPIHVGGGGEFPPNQVSYGGGSNTENIPPWPIDVFLGLNEFNPNYNYMDNGSSKADSGKLGGPDSPVLRSCEEEMDDDDECLGRVPDSSWTVPQIPSPPTASGLYWPKDHLYSSNSAVFVPDICISHVRRPNHVQTNGILSERHRQL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01583 297 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bva07g01583 297 Gene3D Classic Zinc Finger 1 93 - -
Bva07g01583 297 MobiDBLite consensus disorder prediction 110 141 - -
Bva07g01583 297 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva07g01583 297 Pfam B-box zinc finger 54 94 IPR000315 GO:0008270
Bva07g01583 297 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 296 - -
Bva07g01583 297 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bva07g01583 297 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bva07g01583 297 CDD Bbox1_BBX-like 5 47 - -
Bva07g01583 297 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 296 - -
Bva07g01583 297 CDD Bbox1_BBX-like 56 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01583 Bva-Chr7 15283958 15288101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01583 1 273 C2C2-CO-like Transcription Factor Family AT1G78600 51.299 1.19e-92 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Bva07g01583 zf-B_box 7.8e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01583 07 15283958 15288101 Bva07g01583 07 15283958 15288101 ECH