Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01487 ATGAGCAACATAAGCATGGTAGAGGCAAAGCTGCCACCAGGGTTCAGGTTTCATCCTAGAGATGAAGAACTTGTCTGTGATTACTTGATGAAGAAGGTGACCCACCGTGACTCCTCTCTCATGATCGACGTTGACCTAAACAAGTGCGAACCTTGGGATATTCCTGAAACGGCATGTGTGGGAGGGAAGGAGTGGTACTTCTACACTCAGCGAGACCGGAAGTACGCCACCGGGCTTCGCACCAACCGCGCCACCGCCTCCGGCTACTGGAAGGCCACCGGAAAGGACAGGCCTATCCTTCGGAAGGGCACACTGGTTGGCCCTCATGGACCtcctaaaatttcttcaaccaagGAAGACTGGGTTTTGAGTAGGGTATTCTTCAAAAGCAGAGATGTTAAACCAAGCATGGGAAGCTGCTACGACGACACTGGCTCATCATCTCTTCCTGCATTAATGGATTCTTACATAAGTTTTGACCAAGCTCAAACGCACttatttgatgattttgagCAAGTGCCCTGCTTCTCCATCTTCTCTCAAAATCAAACCAACCCCATTTTCAACCACATGAACAGTACATTAGTGGAGCCAAACTTACTGGCCAAGAACAATGCAACCACTTATGGAGGAACACCTGATTTGGGTTCTTGCTTAGATCCTTTTTCCTGTGACAGAAAGGTATTAAAGGCTGTTTTGAGTCAGCTCACAAAATTGGAAAGCAACCCACATAACCCTATTAGCCTAAAAGGGTCACCAAGCTTAGGAGAAGGAAGTTCAGAGAGTTACTTATCAGAAGTGGGCATGCCCAATATGTGGAACAATTATTG 830 0.4542 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVTHRDSSLMIDVDLNKCEPWDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTLVGPHGPPKISSTKEDWVLSRVFFKSRDVKPSMGSCYDDTGSSSLPALMDSYISFDQAQTHLFDDFEQVPCFSIFSQNQTNPIFNHMNSTLVEPNLLAKNNATTYGGTPDLGSCLDPFSCDRKVLKAVLSQLTKLESNPHNPISLKGSPSLGEGSSESYLSEVGMPNMWNNY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01487 276 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 107 - -
Bva07g01487 276 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 116 198 - -
Bva07g01487 276 Pfam No apical meristem (NAM) protein 12 103 IPR003441 GO:0003677|GO:0006355
Bva07g01487 276 Gene3D NAC domain 20 111 IPR036093 GO:0003677|GO:0006355
Bva07g01487 276 PANTHER BNAC05G40360D PROTEIN 3 107 - -
Bva07g01487 276 PANTHER BNAC05G40360D PROTEIN 116 198 - -
Bva07g01487 276 SUPERFAMILY NAC domain 2 129 IPR036093 GO:0003677|GO:0006355
Bva07g01487 276 MobiDBLite consensus disorder prediction 243 263 - -
Bva07g01487 276 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01487 Bva-Chr7 14785327 14789586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01487 2 274 NAC Transcription Factor Family AT1G56010 52.500 3.35e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g01487 NAM 1.3e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01487 07 14785327 14789586 Bva07g01487 07 14785327 14789586 ECH