Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01468 ATGGCTGTTGAAGCGAGGCATCTCAATCTCTTTCTCCCTCAACTCTTAGGAAACCGGGAAATTATGAATCCCAGTGAAGCGAACTTCAATCTGTACAACACACAGATGGGCTTCTCAGTGCCATTATCGGGTACTACTACAACGACCGATACTCTGCTGCCGGCGTATAATTCTTTGATCGCCGATTCGGTTGCTCAGAAAACTGCTGCGATGAAATCAGATAGTGGCCTCACCACCTACAATGTCCCTGTTCCAAGAAAACGTTCTAGGGACTCAATCAACCCATATCTCTGCTACCCCACCACCACTCATTCGCACAAGAATTGTGggtctttctcctttcttggTGAAGACATTTCTCTACAGATCCAGCAGCAACAACTCGACATCGATCGCCTCATTGCCCATCATATGGAGAAGGTGAGGATGGAATtggaggaaaagagaaagaggcaAGCGAGGAGTATAATAGAGGCAATCGAAGTGGGGATGATTAAGAGGCTTAAAGCGAAAGAAGAGGAAATAGAGAAGATTGGTAAATTGAACTGGGCTTTAGAAGAGAGGGTCAAGTCCCTTTGTATAGAGAACCAAATTTGGCGGGATTTGGCTCAAACCAACGAAGCCACGGTCAATGCTCTGCGCTCAGACCTCCAACAAGTATTAGCCCAAGTAAACGACGACCGTGTACACGGTGCCGCTGGATTAGACGATGAAGCCGGCACTGTAGCTCTTCCTGGGGCATGCGCACAAATGGACGATGCCGAGTCTTGCTGCGGCAGCAGCGGCGACCGCGACGATGAAGATAGAGAAATTAATAGCGAGGGGTGGCGCACGGTAGTAGCAGGGGGTGCGAAGGATAAGGATGAAGAGGAGGGTACAAGTAAAACGATCAGAAACAGTGGCAGTAACAGCAGGAACAGATTGTGCAGGAACTGTGGGAAAGAGGAATCGTGCGTGCTGATTCTGCCGTGCAGGCACCTCTGCCTCTGTACTGTTTGTGGGTCTACTCTCCACACTTGTCCCATCTGTAAATCCTTCAAAAATGCCAGTGTCCATGTTATCATGTCCTA 1070 0.4701 MAVEARHLNLFLPQLLGNREIMNPSEANFNLYNTQMGFSVPLSGTTTTTDTLLPAYNSLIADSVAQKTAAMKSDSGLTTYNVPVPRKRSRDSINPYLCYPTTTHSHKNCGSFSFLGEDISLQIQQQQLDIDRLIAHHMEKVRMELEEKRKRQARSIIEAIEVGMIKRLKAKEEEIEKIGKLNWALEERVKSLCIENQIWRDLAQTNEATVNALRSDLQQVLAQVNDDRVHGAAGLDDEAGTVALPGACAQMDDAESCCGSSGDRDDEDREINSEGWRTVVAGGAKDKDEEEGTSKTIRNSGSNSRNRLCRNCGKEESCVLILPCRHLCLCTVCGSTLHTCPICKSFKNASVHVIMS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01468 356 ProSiteProfiles Zinc finger RING-type profile. 309 344 IPR001841 -
Bva07g01468 356 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 355 IPR017066 -
Bva07g01468 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 356 IPR013083 -
Bva07g01468 356 Coils Coil 168 188 - -
Bva07g01468 356 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 355 - -
Bva07g01468 356 Pfam Zinc finger, C3HC4 type (RING finger) 306 345 - -
Bva07g01468 356 MobiDBLite consensus disorder prediction 282 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01468 Bva-Chr7 14689812 14691360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01468 284 345 Miscellaneous Gene Families AT4G39050 33.871 9.50e-07 48.9