Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01461 ATGAAGGAAGGTGGTAGAAAACAAGGTGCAATGTCGCCATGCGCGGCGTGCAAGCTTCTCCGGAGGCGATGCGCGCAGGATTGCGTCTTCGCTCCTTATTTTCCTGCGGATGAGCCCCAGAAATTTGCCAGTGTGCACAAGGTTTTTGGTGCTAGCAATGTCAACAAGATGTTACAGGAACTACCAGAGCACCAGCGCAGTGATGCAGTTAGTTCGATGGTATATGAAGCAAATGCAAGGGTAAGGGACCCTGTGTATGGCTGTGTTGGAGCAATATCATCTCTGCAACAACAAGTTGATGTGCTTCAAACCCAATTGGCACTGGCACAAGCAGAAGTTGTGCACATGAAAATGCACCAATTCACATCAACATCGTCATcagatcatcatcatcatcaccatcaGCAGCAGCATCCATCATTATCCATGCCTGCAGCTTCCAATTCATCATCAGAGAACAACTTATCCCCATCAAGCAGGCTCGTGTCATCTCAGACCAAGTCTTTTTTTGCTATGGACATGGTCGTTGATCAAGCCAACATGGGGCAGTCCTTGTGGTCATGCTA 566 0.4611 MKEGGRKQGAMSPCAACKLLRRRCAQDCVFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLALAQAEVVHMKMHQFTSTSSSDHHHHHHQQQHPSLSMPAASNSSSENNLSPSSRLVSSQTKSFFAMDMVVDQANMGQSLWSC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01461 188 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Bva07g01461 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 183 - -
Bva07g01461 188 MobiDBLite consensus disorder prediction 138 159 - -
Bva07g01461 188 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Bva07g01461 188 MobiDBLite consensus disorder prediction 121 159 - -
Bva07g01461 188 Coils Coil 92 112 - -
Bva07g01461 188 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01461 Bva-Chr7 14633928 14637426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01461 1 188 AS2 family AT1G31320 67.196 2.01e-73 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva07g01461 LOB 1.4e-43 No_clan