Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01400 ATGTTGGTCTTCGCAGCAAAGAGCATACGCTTGGCAAACGGATCCTGCAATCTTATCGCTTGCACCTCACATTTGCTCTCCATGCAAGCTTCCACTCCTCCCCTCTCTCGCCAGATAAGTATGGTTTCCAGGAATGTTACTTCTCAACTTACTAGTGCTGGTCTGTTGCGGACCCAGGGCCTGATTGGAGGGAAATGGGTCGATGCTTATGATGGGAAAACCATAAAGGTTTATAATCCGGCAACTGGTGAACCTATTGCAGATATACCATGTATGGGTGGAAATGAAACAAATGATGCAATATCTTCAGCCTATGATGCATATAGATCTTGGAGCAAAACCACTGCTTCTGAGAGGAGCAAACTTCTGAGGAAATGGTATGATTTGCTAATGGCACATAAAGAAGAGCTTGCACAACTTATAACTTTGGAGCAAGGAAAACCTCTAAAAGAATCTATAGCTGAGGTCAACTATGGGGCTGCTTTTATTGAGTTTTCAGCAGAGGAGGCAAAGCGTGTGTATGGGGATATAATTCCTCCACCTCTATCTGATCGACgcatatttgttttaaagCAGCCTGTAGGGGTTGTTGGTGCAATTACACCTTGGAACTTTCCCCTTGCTATGATTACCCGAAAgGTTGGCCCAGCTCTTGCATGTGGCTGTACTGCGGTCGTAAAACCCTCAGAACTTACTCCACTAACAGCTCTGGCTGCAGCAGAGCTCTCTATTGAAGCTGGAATACCAGCGGGTGTCTTGAATGTTGTTATGGGAAATGCGCCTGATATTGGGGATGCTTTACTTGCAAGTACACAGGTGCGGAAGATCACATTTACAGGTTCAACAGCTGTTGGAAAGAAGTTGATGGCAGGTGCTGCTGGGACAGTTAAAAAAGTATCTCTGGAACTTGGTGGCAATGCACCTTGCATAATATTTGATGATGCTGACCTGGATGTGGCAGTAAATGGAACTGTTGCAGCAAAGTTTCGTAATAGTGGACAAACATGTGTATGTGCCAATAGAATTCTTGTGCAAGAAGGTATCTATGAGAAGTTTGCAAATGCTTTGGTCAATGCtgttcaaaaaatgaaagttgGGGATGGCTTCAGTGAAGGTGTGGTTCAGGGCCCTCTAATCAACGAAGCTGCAGTGAAAAAGGTTGAGTCCTTGATTCAAGATGCTACCTCACagGGGGCAAAAGTAATTCTTGGGGGTCAAAGACATAGCCTTGGATTGACTTTTTATGAACCAACGGTCATCACTGATGTCAAAAATGAGATGCGCATATCAAGGGAGGAAGTATTTGGACCTGTTGCGCCAATTTTGCGGTTCAAAACTGAGGAGGAAGCTATCAGGATTGCTAACGACACCAATGCAGGGTTGGGTTCATACATATTCACCAATAGCGTCCAACGCTCGTGGCGTGTTGCCGAGGCTCTTGAATATGGACTTGTGGGCGTGAATGAAGGCGTCATTTCAACAGAGGTGGCTCCATTTGGTGGTGTTAAACAATCTGGCCTCGGAAGGGAAGGGTCCAAATATGGAATGGATGAATATTTGGAGATCAAGTATGTCTGCTTGGGAAACATGAACAAAGAGTA 1601 0.4416 MLVFAAKSIRLANGSCNLIACTSHLLSMQASTPPLSRQISMVSRNVTSQLTSAGLLRTQGLIGGKWVDAYDGKTIKVYNPATGEPIADIPCMGGNETNDAISSAYDAYRSWSKTTASERSKLLRKWYDLLMAHKEELAQLITLEQGKPLKESIAEVNYGAAFIEFSAEEAKRVYGDIIPPPLSDRRIFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTAVVKPSELTPLTALAAAELSIEAGIPAGVLNVVMGNAPDIGDALLASTQVRKITFTGSTAVGKKLMAGAAGTVKKVSLELGGNAPCIIFDDADLDVAVNGTVAAKFRNSGQTCVCANRILVQEGIYEKFANALVNAVQKMKVGDGFSEGVVQGPLINEAAVKKVESLIQDATSQGAKVILGGQRHSLGLTFYEPTVITDVKNEMRISREEVFGPVAPILRFKTEEEAIRIANDTNAGLGSYIFTNSVQRSWRVAEALEYGLVGVNEGVISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGNMNKE 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01400 533 CDD ALDH_F5_SSADH_GabD 77 527 - -
Bva07g01400 533 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 530 - -
Bva07g01400 533 TIGRFAM SSADH: succinate-semialdehyde dehydrogenase 77 523 IPR010102 GO:0009013|GO:0009450
Bva07g01400 533 Pfam Aldehyde dehydrogenase family 66 525 IPR015590 GO:0016491
Bva07g01400 533 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 53 530 - -
Bva07g01400 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 494 IPR016163 GO:0016620
Bva07g01400 533 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Bva07g01400 533 SUPERFAMILY ALDH-like 51 531 IPR016161 GO:0016491
Bva07g01400 533 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 519 IPR016162 GO:0016491
Bva07g01400 533 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01400 Bva-Chr7 14335769 14344693 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01400 07 14335769 14344693 Bva07g01400 07 14335769 14344693 ECH