Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01399 atggaaaGAATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCCCATGACAGACCCATGTGTGTTCAAGGTGACTCTGGTCTTGTTCTCACCACTGACCCAAAACCTCGCCTTCGCTGGACCGTTGAGCTCCATGAACGCTTCGTCGATGCTGTTACACAGCTTGGAGGGCCTGATAAGGCCACTCCTAAGACCATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTGGGAAAGCAACCCCACAAGGAATTCAATGAACACTCGATTAAGGATGGTATGAGAGCTTCGGCTTTAGAACTGCAAAGAAGCACAGCTTCATCATCTGCGATGATTGGCCGCAACATGAATGAGATGCAAATGGAGGTGCAGAGAAGAATCCATGAACAACTCGagGTTCAGAAACACCTTCAGCTGAGGATTGAGGCTCAAGGAAAATACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCAACTGCTGCCACTAATTTAAAGGGTATCGGACCCCAAGGCATCCCTGACATGGGAGTCCTCAAAGATTTTGGTTCCCCTcttaattttccttcttttcaagACCTTAACATCTATGGCGGTGACCAACTTGATCTTCAGCATAGCTTGGACAGGCCACCCCTTGAAGGGTTCATGCCCAATAATGAGAATTTGTGCTTGGGGAAGAAGAGGCTTAACCCCTATAGTGGTAGTGGGAAGAGCCCTTTAATTTGGAATGATGATCTAAGGCTTCAAGATTTGGGAACAGCATCATCTTGTCTTGGGCCTCAAGATGATCCTTTCAAAGGTGACCAAATTCAGATTGCACCACCTTCAATGGATAGAGGCACTGACATTGAATCCATCTCGGAAATCTACGATACGAAGCCGGTACTCCAAGGTGAAGCTGTGGGAGAGAAGAAACTTGATGCATCGGTGAAGCTTGAAAGGCCATCACCCAGAAGAGCTCCACTTCAAGCAGAAAGGATAAGCCCTATGATTAATGCTGGTACTGTTGCACAAGGTAGAGGTTCACCATTTGGGtg 1094 0.4561 MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEHSIKDASALELQRSTASSSAMIGRNMNEMQMEVQRRIHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMATAATNLKGIGPQGIPDMGVLKDFGSPLNFPSFQDLNIYGGDQLDLQHSLDRPPLEGFMPNNENLCLGKKRLNPYSGSGKSPLIWNDDLRLQDLGTASSCLGPQDDPFKGDQIQIAPPSMDRGTDIESISEIYDTKPVLQGEAVGEKKLDASVKLERPSPRRAPLQAERISPMINAGTVAQGRGSPFG 361
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01399 361 Gene3D - 34 92 - -
Bva07g01399 361 MobiDBLite consensus disorder prediction 1 20 - -
Bva07g01399 361 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 35 90 IPR006447 GO:0003677
Bva07g01399 361 Pfam MYB-CC type transfactor, LHEQLE motif 128 167 IPR025756 -
Bva07g01399 361 MobiDBLite consensus disorder prediction 328 361 - -
Bva07g01399 361 SUPERFAMILY Homeodomain-like 34 90 IPR009057 -
Bva07g01399 361 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 311 - -
Bva07g01399 361 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 311 IPR044848 GO:0003700
Bva07g01399 361 MobiDBLite consensus disorder prediction 273 296 - -
Bva07g01399 361 Pfam Myb-like DNA-binding domain 38 86 IPR001005 -
Bva07g01399 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 92 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva07g01399 Bva-Chr7 14327864 14329953 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva07g01399 Myb_DNA-binding 1.9e-06 CL0123
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01164 09 6210898 6212952 Bva07g01399 07 14327864 14329953 BWGD
Bva07g01399 07 14327864 14329953 Bva07g01399 07 14327864 14329953 ECH