Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva07g01391 | ATGAAACAAGTTGAAGATATAAGACAACAACTGCAAGAAGAGTGTGAATATGCCCAAAAGCATACAAAGAAGTTAGTTGAAAAAGTTAAAGCAGCTGAAGCTAGAGCTGCTGCTGCTAGCTCACAAGTATGCCAAAGTATCCACTGGAGATTATGGCATAGATATGAATGCCTTGAAATAGAGTTGAGGTTAACTCAAGGAAGATCTGCAGATACTGAGGGAACCTCTAAGCTCGTCCACGATCATGAAAGCAGTTCTTACACAAGtcatgaagatgaagaggatTCAGATATTGAAGACAGAAGAGAGGAGCCCATTCATGAGTTCAATAATCCAACTGGAATGCTTGGAGCTCTTAACAATTACAACGGTTGTGCAGTTTGTGGCAATCCAATCACAAGAAAATTCTCAAGATGCAAATCCTTCATATGCTGGCGCTCACCAAAATGTGAAAACCTAGACTGGAAAATTGGCCATGAATTTCAAGGCAATGTTGAGATGGTTGATTCGGATAAACCAGTGATCGCTGGTCAAGGAAGATCAGTTCATCCAAAcgTTAGAATGCTACAGACTAGATATGAAGAGAAAGATAGTACTCATTCCTCAGTTCCCCTTTCAACGAGATCTTCTTCAGAAGGAACCACCAATTCCAAGCTTCTCATTGGAACTTCTCAGGACACTAACGAGAAATTTCAAGAGGAGATTGCACAACGAGTGAGATGCCTTGAGGAAGAATTAGCAAAGTCTAGGAATGAGAATAGGTTACTGAAATCAGAGCGTGGAAACTGGGATATGCGAGCCAAGTTTGTTGCAGATAGACTTCACAGCTACATGACGGAATCTCAAAATCAGTTGTTGATTATGAAGCATGAAAAGGAACAGATATCAAATGCTGAGAAGCAAGCTCGTGATATGGTTCAGAATTTATCCGAGAGGCTTCACCGCTTGCAGATTGCAGagcagagaaaagaagaatatatacaAAAGCTGCAGAATGAATGTGCTAAGGCCAAGAAAGAACTAGAAGAAGAGAGCTTATCTGTCCGCACGCTTACAATGGAGCGTGAAGAGGCTAATCAAAGGGTCATTAATGCCCTTAATGCTGTAGCAACTGCTGATTCCAGAGCTGCTGATGCTGAGGCTTGTGCAATCTGCCTGACCAATGAAAAGGACATGGCATTTGGATGCGGGCACATGAGTTGCAGAGATTGTGGGTCAAAGATATCCAAATGTCCTATTTGTCGGAAAAAGATCACCAGCAGAGTTAAGCTGTTTTCTGGGTG | 1283 | 0.4061 | MKQVEDIRQQLQEECEYAQKHTKKLVEKVKAAEARAAAASSQVCQSIHWRLWHRYECLEIELRLTQGRSADTEGTSKLVHDHESSSYTSHEDEEDSDIEDRREEPIHEFNNPTGMLGALNNYNGCAVCGNPITRKFSRCKSFICWRSPKCENLDWKIGHEFQGNVEMVDSDKPVIAGQGRSVHPNVRMLQTRYEEKDSTHSSVPLSTRSSSEGTTNSKLLIGTSQDTNEKFQEEIAQRVRCLEEELAKSRNENRLLKSERGNWDMRAKFVADRLHSYMTESQNQLLIMKHEKEQISNAEKQARDMVQNLSERLHRLQIAEQRKEEYIQKLQNECAKAKKELEEESLSVRTLTMEREEANQRVINALNAVATADSRAADAEACAICLTNEKDMAFGCGHMSCRDCGSKISKCPICRKKITSRVKLFSG | 427 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva07g01391 | 427 | Coils | Coil | 288 | 368 | - | - | |
| Bva07g01391 | 427 | MobiDBLite | consensus disorder prediction | 74 | 91 | - | - | |
| Bva07g01391 | 427 | SMART | ring_2 | 382 | 414 | IPR001841 | - | |
| Bva07g01391 | 427 | MobiDBLite | consensus disorder prediction | 202 | 218 | - | - | |
| Bva07g01391 | 427 | MobiDBLite | consensus disorder prediction | 193 | 218 | - | - | |
| Bva07g01391 | 427 | Pfam | Zinc finger, C3HC4 type (RING finger) | 379 | 420 | - | - | |
| Bva07g01391 | 427 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RGLG4 | 372 | 425 | - | - | |
| Bva07g01391 | 427 | ProSiteProfiles | Zinc finger RING-type profile. | 382 | 415 | IPR001841 | - | |
| Bva07g01391 | 427 | MobiDBLite | consensus disorder prediction | 71 | 100 | - | - | |
| Bva07g01391 | 427 | Coils | Coil | 1 | 42 | - | - | |
| Bva07g01391 | 427 | SUPERFAMILY | RING/U-box | 362 | 421 | - | - | |
| Bva07g01391 | 427 | PANTHER | COPINE FAMILY PROTEIN 1 | 372 | 425 | - | - | |
| Bva07g01391 | 427 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 369 | 426 | IPR013083 | - | |
| Bva07g01391 | 427 | Coils | Coil | 232 | 259 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva07g01391 | Bva-Chr7 | 14277099 | 14284049 | Tandem |