Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01390 ATGTTTGTTTTTTATGGGGCTTTGTCATTGAACTTAGATTGGCTTCATCGGTTTCTTCGTTTGGAAGAGAAAGGATTGAGTAGTTCAGACAATAAAGTTGGTGGGTCTTGGTCCCTGTGTCTTATATTGTTGGCAATACTTGGGTTGCTTCACTTGGCAGAAAAAAACAGGGCACCCAGTTCCAATGGCAACAAGGATGAGCAGAGCGAGCTGAAAGCAGAGGAGGAGGAGCCAACAGGCCATGAGATACACCCAGATAGCTTTGATTACCATAAGGGTGGTGAGTTTTCCGGTGACCGGACTGCCATGTATGGCGGCGAATGCGCCTTCTGTGGAAATTTAAGCAGCACCAGGTGCTCTCGCTGCAAGGCAGCTAGATATTGCTCGGTGGAATGCCAAATTGGACACTGGAGAGCAGGGCATAAGTTTGAATGCGTTGAGACAGAGACGGCGGAGCCACAAGCAAGTCCTGTTCATAGAGCCTCTAAACTTgtcaagaaaaatagaaagAAAAGCTATTATGCCTCCAACAACGTTGTTGAGTGGAACACAAGTGGGGGAGAGGTGGAATGTGAGCAGCGCAATGATGAGTACAGGGCAATTGTTAGCAGTTGCAATATTGACAATGGCTGCGCCGTATGTGGAGGTCCAGCCACTACAAGCTGCTCAAGATGCAAAGCAGTCAGATACTGCTCACCAAAATGCTTAATTGAGGACTGGACATGGCATAAAGTTCACTGCTCTGCTGGGGAAGTGAATTCCACCAAAGCTGAAAGTCCTCCTTATGAAAGCATTAAAATACCCCAGAACTTAGGTGAAGGAGAAGATGCTCAATTATATGGTCAACTTTCATTGGAATATTATCCAGAGGGAGCCACCAACACCAAATCTCTGGTTGCAATCTCTCAGGAACCTGCTAAAAAAGAGCAAGGCCATACTGCAGAATTGGTGAGATGGTATGACAACGAACTTGAGAAATCTAGGAATGAGATTATACTCCTAAGATCAGATCGTGATAAGTGGGCGGGGCGAGCAAACTTTGCCAGAGAGAAATATCGCAGTTTCAAGAAGGAAGTGGAGCAACAGTTGTTTGTGTTGAAGCATGAAAAGGAGTTGGTATTGAATGCTGAGAGGCAAGCTCGCAATATGAATCAAAGTTTATCTGATAGGCTATACCACTTGCAGATTGCGGTACAAGCAAGCGTCgcagagaagagaaaacaagaagaatatatacaaattcTCGAGAGCAAATGGGCTCAGACAAAGAAAGAGCTGCAAGAAGAGAGATTGCATTCACAATGGCTTACAGTGGCTCGTGACAGGAGTCTTGAAACTGCACAAGTTTCCATGGCACAAGTTGAAGAGCTAAAACAACAGTTGCAAGTAGAGCGTGAAAATGTCCGAAAGCTTACAGAGAATTTACttgaaaatgttaaaactGCTCAATCTAGAGCTGCTGTTGCTGAGAAAAGACTCCGTGATCTTGAGAGAAAAATCAAGTCAACAAATGATAAGGTTCCTGTCTGGACAGACAGTACAGGCAAACCTGCTATGGCATGTGCTATATGCTTGAGCCATGAAAAGGACTTGGCCTTTGGATGTGGCCACATGACATGTAGAGATTGTGGATCAAAAGTTTCCAAGTGTCCTATTTGCCGGGAGCAGATCACTAGCAGTGTCAGGCTGTTTCCTGGGTA 1700 0.4365 MFVFYGALSLNLDWLHRFLRLEEKGLSSSDNKVGGSWSLCLILLAILGLLHLAEKNRAPSSNGNKDEQSELKAEEEEPTGHEIHPDSFDYHKGGEFSGDRTAMYGGECAFCGNLSSTRCSRCKAARYCSVECQIGHWRAGHKFECVETETAEPQASPVHRASKLVKKNRKKSYYASNNVVEWNTSGGEVECEQRNDEYRAIVSSCNIDNGCAVCGGPATTSCSRCKAVRYCSPKCLIEDWTWHKVHCSAGEVNSTKAESPPYESIKIPQNLGEGEDAQLYGQLSLEYYPEGATNTKSLVAISQEPAKKEQGHTAELVRWYDNELEKSRNEIILLRSDRDKWAGRANFAREKYRSFKKEVEQQLFVLKHEKELVLNAERQARNMNQSLSDRLYHLQIAVQASVAEKRKQEEYIQILESKWAQTKKELQEERLHSQWLTVARDRSLETAQVSMAQVEELKQQLQVERENVRKLTENLLENVKTAQSRAAVAEKRLRDLERKIKSTNDKVPVWTDSTGKPAMACAICLSHEKDLAFGCGHMTCRDCGSKVSKCPICREQITSSVRLFPG 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01390 566 MobiDBLite consensus disorder prediction 57 91 - -
Bva07g01390 566 Gene3D - 98 151 - -
Bva07g01390 566 Gene3D - 199 251 - -
Bva07g01390 566 Pfam Zinc finger, C3HC4 type (RING finger) 520 559 - -
Bva07g01390 566 SMART ring_2 521 553 IPR001841 -
Bva07g01390 566 PANTHER PROTEIN, PUTATIVE-RELATED 108 564 - -
Bva07g01390 566 ProSitePatterns Zinc finger MYND-type signature. 108 145 IPR002893 -
Bva07g01390 566 Coils Coil 366 386 - -
Bva07g01390 566 ProSiteProfiles Zinc finger RING-type profile. 521 554 IPR001841 -
Bva07g01390 566 SUPERFAMILY RING/U-box 520 560 - -
Bva07g01390 566 MobiDBLite consensus disorder prediction 67 91 - -
Bva07g01390 566 PANTHER COPINE FAMILY PROTEIN 1 108 564 - -
Bva07g01390 566 Pfam MYND finger 108 145 IPR002893 -
Bva07g01390 566 Pfam MYND finger 211 247 IPR002893 -
Bva07g01390 566 ProSitePatterns Zinc finger MYND-type signature. 211 247 IPR002893 -
Bva07g01390 566 ProSiteProfiles Zinc finger MYND-type profile. 108 145 IPR002893 -
Bva07g01390 566 SUPERFAMILY HIT/MYND zinc finger-like 207 249 - -
Bva07g01390 566 SUPERFAMILY HIT/MYND zinc finger-like 104 146 - -
Bva07g01390 566 Coils Coil 444 506 - -
Bva07g01390 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 511 565 IPR013083 -
Bva07g01390 566 ProSiteProfiles Zinc finger MYND-type profile. 211 247 IPR002893 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01390 Bva-Chr7 14272436 14276275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01390 93 164 Miscellaneous Gene Families AT4G31670 39.474 2.33e-10 61.2