Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01373 ATGTCTATGTCACTGGCTTCCCTCTTATCCACATCCCAGCTGAGGACGAGTTTCTGTGGGGGACAAATTGAAACTaaggaaaaaatgaagtaCGTTTTGGTGACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGGGTCGCAGCTAGCAGTATTGGAGTTGTCCTCAAGGCCTGTGGCCTTCGGGTGACTTCTATTAAGATTGATCCCTATTTGAACACTGATGCGGGGACAATGTCTCCTTTTGAGCATGGAGAGGTGTTTGTCTTAGATGATGGCGGTGagGTTGACCTTGATCTTGGAAACTATGAGCGTTTTCTGGACCTCAAATTAACTCGTGACAATAATATCACCactggaaaaatatatcagTCTGTCattgaaaaagagagaagaggagaTTATCTTGGAAAGACTGTTCAGGTTGTTCCACACATTACAGATGCCATCCAAGACTGGATAGAGCGTGTAGCAAAAATATCAGTTGATGGAGTTGAAGGGCCAGCTGATGTTTGTATCATTGAACTGGGTGGAACTATAGGGGACATTGAGTCTGCCCCTTTTATTGAGGCACTAGTCCAATTTTCACATCGCGTTGGCCCTGGGAACTTCTGTTTGGTTCATCTCAGCCTCGTACCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCCACTCAGCATAGTGTCCGGCAACTTAGAGGATTGGGGTTCTCCCCTAATATTCTAGCTTGTCGCAGTACAAAGGAGCTTGAAGAAAATGTTAAGGCAAAACTTGTTCAATTTTGCCATGTACCGTTGGAAAACATAGTCACTCTTTATGATGTTCCTAATATTTGGCACATACCTTTGCTACTAAGAGACCAGAAGGCGCACGAGGCAATCTTGAAAGCATTAAACCTTCAAAGTGATACCAAAAAGCCCAATCTGAGGGAGTGGACTGAAAGGACGAAAATTTGTGACAGCTTGCGTGAACCTGTCAGAATCGCGATGGTGGGAAAATACACCGGCCTTAAAGATGCATATCTTTCTGTTCTGAAGGCACTTTTGCATGCTTCTGTGGCTTGCAGACGCAAACTTATTGTGGACTGGGTTGCAGCCGGGGACCTTGAAGATACTACTGCTGAAGAGGATCCTGATGCGCATAGAACTGGTTGGGGTCTTTTGAAGGGTGCCAATGGCATTTTAGTTCCAGGAGGTTTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCTGCTAAGTATGCTCgagaaaataatattccaTATCTGGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTTGCACGATCTGTTCTGGGTCTGCATGATGCTAATAGTGCAGAGTTTGATCCTGCAACCAAGAACCCTTGCGTTATATTTATGCCAGAGGGTTCAAAGACTCATATGGGAGGAACTATGCGTCTTGGCTCAAGAAGGACTTACTTCCAAGTTGCTGACTGCAAATCGGCAAAGTTGTATGGTAATGTAGATTTTGTTGATGAGCGACATCGGCACAGATACGAGGTTAATCCTGAAATGATATCACAACTAGAGAGTGCTGGTCTATCATTTGTTGGCAAAGATGAAACCGGGAGGCGTATGGAGATAGTTGAACTGGTTGGCCATCCTTTCTTCATTGGCGTTCAGTTTCACCCTGAGTTCAAATCCAGACCAGGGAACCCTTCTCCACCCTTCTTAGGATTGATTGCAGCTGCTAGTGAACCGAGGACAGTTTTGCCTCAAAATACCAGTAAGTTAACTAATGGGATTTCTAATGGGCATGCACCAATCTCAAAAGTGCACTTCCATGGAAATGGGTTCAAATCTGCAAATGGTTCGTTAAACGGTGTATACACTAATGGCAATGGCAATGGCGTACATATGGATGGAATTGGCAATGGCGTATATATTGATGGAAATGGCAGTTGCAATGGCGTATATGTGGATGGAAGTTGGTA 1964 0.4302 MSMSLASLLSTSQLRTSFCGGQIETKEKMKYVLVTGGVVSGLGKGVAASSIGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQDWIERVAKISVDGVEGPADVCIIELGGTIGDIESAPFIEALVQFSHRVGPGNFCLVHLSLVPVLNVVGEQKTKPTQHSVRQLRGLGFSPNILACRSTKELEENVKAKLVQFCHVPLENIVTLYDVPNIWHIPLLLRDQKAHEAILKALNLQSDTKKPNLREWTERTKICDSLREPVRIAMVGKYTGLKDAYLSVLKALLHASVACRRKLIVDWVAAGDLEDTTAEEDPDAHRTGWGLLKGANGILVPGGFGDRGVQGKILAAKYARENNIPYLGICLGMQIAVIEFARSVLGLHDANSAEFDPATKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNVDFVDERHRHRYEVNPEMISQLESAGLSFVGKDETGRRMEIVELVGHPFFIGVQFHPEFKSRPGNPSPPFLGLIAAASEPRTVLPQNTSKLTNGISNGHAPISKVHFHGNGFKSANGSLNGVYTNGNGNGVHMDGIGNGVYIDGNGSCNGVYVDGSW 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01373 654 CDD CTPS_N 30 296 IPR017456 GO:0003883|GO:0006221
Bva07g01373 654 Pfam Glutamine amidotransferase class-I 337 572 IPR017926 -
Bva07g01373 654 Pfam CTP synthase N-terminus 30 300 IPR017456 GO:0003883|GO:0006221
Bva07g01373 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 300 IPR027417 -
Bva07g01373 654 Hamap CTP synthase [pyrG]. 29 578 IPR004468 GO:0003883|GO:0006221
Bva07g01373 654 Gene3D - 323 587 IPR029062 -
Bva07g01373 654 PANTHER CTP SYNTHASE 29 599 IPR004468 GO:0003883|GO:0006221
Bva07g01373 654 TIGRFAM PyrG: CTP synthase 28 573 IPR004468 GO:0003883|GO:0006221
Bva07g01373 654 Gene3D - 21 320 IPR027417 -
Bva07g01373 654 SUPERFAMILY Class I glutamine amidotransferase-like 325 576 IPR029062 -
Bva07g01373 654 CDD GATase1_CTP_Synthase 326 571 IPR033828 GO:0003883|GO:0006241
Bva07g01373 654 PANTHER CTP SYNTHASE 29 599 - -
Bva07g01373 654 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 327 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01373 Bva-Chr7 14154491 14161240 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g01251 09 6746279 6750150 Bva07g01373 07 14154491 14161240 BWGD
Bva07g01373 07 14154491 14161240 Bva07g01373 07 14154491 14161240 ECH