Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01284 ATGAGGAAACCTGATTTGATtgggaaagaacaaaaaatgaacAGTAACTGCAGCAACAATATTAAGAGCAAGCTAAGGAAGGGGTTATGGTCACCTGAGGAAGATGAGAAGCTGATAAGGTACATGTTGACGAATGGACAAGGGTGTTGGAGTGACATTGCTAGGAATGCTGGCCTCCAAAGGTGTGGCAAGAGTTGTCGCCTTCGTTGGATCAATTACTTGAGACCTGACCTCAAGCGTGGTGCTTTTTCACCACAAGAGGAAGAGCTCATCGTTCATTTGCACTCCATTCTTGGCAACAGGTGGTCTCAGATTGCTGCACGTCTACCTGGAAGGACAGACAATGAGATTAAGAATTTCTGGAATTCCACATTGAAGAAAAGGTTGAAAACCAACAATGCTTCCACAACATCACCAAACAACAGTGACTCATCAGAGCCTACTAGAGATGTTTTAGGTGGGATGATGCCTATTAATGAACATGATCTCATGACCATGTGCATGGATtcctcttcatcatcttcaccCTCATCCATACAATCCATGCAAGCCATGGCTTTTGCTGATCAATTCGATCCCTTTTCGATGTTAAACAATCGCTATGACATGGTCAATGCAGCCAGTTTCACTGACATGTCTTCATGCTTAACCCAAGTTGGCATGGTCGATGGGCTTTATGGTGATTATGGGATGTTAGAGCCTAATAAGATGGGGTTAGAAAGAGACCTCTCGCTTCCTCCACTAGAAAGTAGAAGCATTGAAGAAAATAGTGCTCCAATTGATGTGAAAAGCCATAACAACCACTTCAATAATAGTTGCTTCAATAACACTGATCATCAGATTCAGAATCACAACTCTAAAGTAGAGGACTTGTTTGGGTTTGGAAATCATGGGCAAGGAGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTCTGATGCAGGATATATcctctttccctttccttgaTTTCCAAGTTGAATA 986 0.3976 MRKPDLIGKEQKMNSNCSNNIKSKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKTNNASTTSPNNSDSSEPTRDVLGGMMPINEHDLMTMCMDSSSSSSPSSIQSMQAMAFADQFDPFSMLNNRYDMVNAASFTDMSSCLTQVGMVDGLYGDYGMLEPNKMGLERDLSLPPLESRSIEENSAPIDVKSHNNHFNNSCFNNTDHQIQNHNSKVEDLFGFGNHGQGENLRMGEWDLEGLMQDISSFPFLDFQVE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01284 328 CDD SANT 30 74 IPR001005 -
Bva07g01284 328 Pfam Myb-like DNA-binding domain 80 124 IPR001005 -
Bva07g01284 328 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Bva07g01284 328 MobiDBLite consensus disorder prediction 131 151 - -
Bva07g01284 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 74 IPR017930 -
Bva07g01284 328 PANTHER TRANSCRIPTION FACTOR MYB83 1 328 - -
Bva07g01284 328 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Bva07g01284 328 SMART sant 26 76 IPR001005 -
Bva07g01284 328 SMART sant 79 127 IPR001005 -
Bva07g01284 328 PANTHER MYB DOMAIN PROTEIN 55 1 328 - -
Bva07g01284 328 Gene3D - 82 151 - -
Bva07g01284 328 Gene3D - 24 80 - -
Bva07g01284 328 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Bva07g01284 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
Bva07g01284 328 SUPERFAMILY Homeodomain-like 25 121 IPR009057 -
Bva07g01284 328 CDD SANT 82 125 IPR001005 -
Bva07g01284 328 MobiDBLite consensus disorder prediction 131 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01284 Bva-Chr7 13600033 13602139 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g01284 Myb_DNA-binding 4.1e-13 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01284 07 13600033 13602139 Bva09g01284 09 6951481 6953899 ECH
Bva07g01284 07 13600033 13602139 Bva07g01284 07 13600033 13602139 ECH