Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01282 ATGTGTGGTGGTCCAGATAAATCAAAATCACCTTCAACTACATCTTCCTCTGCTGTAGAACACGCAACTAACACCAAAGACATGAAACACCTAACTGTTCATACAGAAGATTCTTTTTCCAGTTTACTGGAACTTGCTTCTAACAATGATATTGAAGGCTTTAAGCTGGTATTAGAAAGGGATTCTTCTTCAGTTAATGAAGTTGGGCTCTGGTATGGCCGCCAAAATGGATCCAAACAAATTGTTCTTGAGCATAGAACTCCACTAATGGTTGCTGCTACCTATGGCAGCATTGATGTTCTGAAGCTTATACTCTCATATCCAGAGGCTGATGTAGATTTATCCTGTGGGATGGATAGGAGCACTGCCCTTCACTGTGCTGCTTCTGGTGGGTCTACTAACGTGATTGATGCTGTGAAGCTTCTTTTATCAGCTGGCGCTGACCTTAATTGTAGGGATGCAAATGGAAATCGTCCTGTTGATGTCATTATTGTTCCTCCCAAGCTGCCAGCCATGCGAGCAGTTCTGGAGGAGCTTCTTTCGTATAATTCTTCAGATGGCTCCATCAGTGACTCCATTGCAATATCCGTTAATTCACTGAGTCCTGATTCAGCTGCtcattcttcttcctctgaaAATGGGTTGCCATCCTCTCCTTCAGGCTCATCGTCTTCTCCagcagcttcaaagttcactgATATGCCTGTTGGTTCTACAtctgaaaagaaagagtatcCAATTGATCCATCGCTTCCGGATATAAAAAATAGCATATATGCAACAGATGAGTTTCGCATGTTCTCATTCAAGGTCCGGCCTTGTTCCCGGGCATACTCTCATGACTGGACTGAGTGTCCTTTTGTTCATCCAGGGGAGAATGCTCGCAGGAGAGATCCCAGAAAATTCCATTACAGCTGTGTGCCATGCCCTGACTTTCGTAAGGGGGCTTGTAGACGTGGAGATATGTGCGAATATGCTCATGGAGTATTTGAATGCTGGCTACACCCAGCTCAGTATCGTACACGTCTCTGCAAAGATGGTACGAGCTGCAATAGGAGGGTGTGTTTCTTTGCTCACACTGCTGAAGAGCTGCGTCCACTATATGTTTCCACCGGATCTCCTGTCCCTTCACCACGTTCCTTGGGTTCTGCTAATGTGATGGACATGGCTGCTGCACTGAGCCTTTTGCCAGGTTCACCTTCGTCAGTCTCATCCATGTCTCCGTCCCCCTTTGCTCAGCCCATGTCTCCAGCTGCAAATGGCATTTCACACTCATCTGGACCTTGGCCACAACCAAACGTCCCAGTGCTTCATCTACCAGGAAGCAGTTTTCAATCTAGTCGACTGAGATCTTCCCTTAGTGCCCGAGATATTCCCCCTGAAGACTTGAATATGTTGCCAGATTTTGATGGCCAGCAACAGCTTTTGAATGATTTGAGTTGTTTCTCACAGCCCCGTCCTGGTGCTGCCTCAGTGAATCGATCCGGTCGGTCTAAGACACTAACTCCATCAAATCTTGAAGAGCTCTTTTCTGCTGAGATTACTTCATCTCCTCGTTATTCTGACCCAGCAGCGGCTTCTGTTTTCTCTCCTACACACAAATCGGCTTTCTTCAATCAGTTTCAGCAGGTTCCAAGCATGTTATCCCCCATAAACGCCAATGTTCTGTCCCCGAAAAATGTTGAGCATCCTCTGTTACAGGCTTCATTTGGTGTCTCTTCTCCTGGAAGGATGTCTCCAAGAAGTGTGGAGCCAATCTCTCCCATGAGTGCTCGTTTATCTGCCTTTGCTCAGCGTGAGAAACAGCAAAAACAGCTGCGGAGCCTTAGTTCAAGGGACCTTGGTTCCAACAATCCTGCTTCAGTTGTTGGATCCCCAGTAAGCTCTTGGTCTAAGTGGGGACCTTCCAATGGAAAAGTAGATTGGGCAGTTAATGGGGATGAGCCAGGACGATTGCCGAGATCATCTTCGTTTGAGCTCGGGAACAATGGGGAAGAGCCTGACCTATCTTGGGTCCAATCCCTGGTCAAGGAATCCCCACCAGAAATGCTGAAAGAGAAGTTGGGTGCCTCTGGCCCCTTTGCATCTGCTGATGGGCTGACTTCCGATTCTCAAATTGATTCCATTGATCATTCTGTTTTAGGAGCTTGGCTTGAGCAAATGCAGCTGGATCAGCTTGTAGTCTA 2186 0.4579 MCGGPDKSKSPSTTSSSAVEHATNTKDMKHLTVHTEDSFSSLLELASNNDIEGFKLVLERDSSSVNEVGLWYGRQNGSKQIVLEHRTPLMVAATYGSIDVLKLILSYPEADVDLSCGMDRSTALHCAASGGSTNVIDAVKLLLSAGADLNCRDANGNRPVDVIIVPPKLPAMRAVLEELLSYNSSDGSISDSIAISVNSLSPDSAAHSSSSENGLPSSPSGSSSSPAASKFTDMPVGSTSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTAEELRPLYVSTGSPVPSPRSLGSANVMDMAAALSLLPGSPSSVSSMSPSPFAQPMSPAANGISHSSGPWPQPNVPVLHLPGSSFQSSRLRSSLSARDIPPEDLNMLPDFDGQQQLLNDLSCFSQPRPGAASVNRSGRSKTLTPSNLEELFSAEITSSPRYSDPAAASVFSPTHKSAFFNQFQQVPSMLSPINANVLSPKNVEHPLLQASFGVSSPGRMSPRSVEPISPMSARLSAFAQREKQQKQLRSLSSRDLGSNNPASVVGSPVSSWSKWGPSNGKVDWAVNGDEPGRLPRSSSFELGNNGEEPDLSWVQSLVKESPPEMLKEKLGASGPFASADGLTSDSQIDSIDHSVLGAWLEQMQLDQLVV 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01282 728 MobiDBLite consensus disorder prediction 205 236 - -
Bva07g01282 728 MobiDBLite consensus disorder prediction 596 635 - -
Bva07g01282 728 SMART c3hfinal6 303 329 IPR000571 GO:0046872
Bva07g01282 728 SMART c3hfinal6 338 361 IPR000571 GO:0046872
Bva07g01282 728 MobiDBLite consensus disorder prediction 205 248 - -
Bva07g01282 728 Gene3D - 303 366 - -
Bva07g01282 728 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 22 726 - -
Bva07g01282 728 SMART ANK_2a 84 114 IPR002110 GO:0005515
Bva07g01282 728 SMART ANK_2a 37 67 IPR002110 GO:0005515
Bva07g01282 728 SMART ANK_2a 119 151 IPR002110 GO:0005515
Bva07g01282 728 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 308 328 IPR000571 GO:0046872
Bva07g01282 728 SUPERFAMILY Ankyrin repeat 35 163 IPR036770 -
Bva07g01282 728 ProSiteProfiles Zinc finger C3H1-type profile. 308 330 IPR000571 GO:0046872
Bva07g01282 728 PANTHER UNKEMPT FAMILY MEMBER 22 726 IPR045234 -
Bva07g01282 728 MobiDBLite consensus disorder prediction 596 666 - -
Bva07g01282 728 Pfam Ankyrin repeats (3 copies) 48 153 IPR002110 GO:0005515
Bva07g01282 728 PRINTS Ankyrin repeat signature 138 152 IPR002110 GO:0005515
Bva07g01282 728 PRINTS Ankyrin repeat signature 120 135 IPR002110 GO:0005515
Bva07g01282 728 MobiDBLite consensus disorder prediction 7 22 - -
Bva07g01282 728 MobiDBLite consensus disorder prediction 1 27 - -
Bva07g01282 728 ProSiteProfiles Ankyrin repeat profile. 119 154 IPR002110 GO:0005515
Bva07g01282 728 Gene3D - 6 165 IPR036770 -
Bva07g01282 728 ProSiteProfiles Ankyrin repeat region circular profile. 119 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01282 Bva-Chr7 13570464 13574461 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bva07g01282 Ank_2 4.2e-10 CL0465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01282 07 13570464 13574461 Bva09g01289 09 6984039 6987889 ECH
Bva07g01282 07 13570464 13574461 Bva07g01282 07 13570464 13574461 ECH