Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01280 ATGGAGTCAGAAGAGCAAGCTGGGGCAAAGCCTATGACTGCCTTGGGCGGCCAGGTCTGCCAGATCTGTGGTGATAATGTTGGGAAGACTGTGGATGGTGAACCATTCATTGCTTGCCATGTTTGCGCTTTTCCAGTTTGCAGGCCTTGCTATGAGTATGAGAGGAAGGATGGGAATCAATCTTGCCCCCAATGTAAAACCCGGTACAAGAGACACAAAGGAAGTCCTGCGATTCTTGGGGACAGAGAAGAGGATGGTGGTGTTGATGATGGTGCCAGTGACTTAAATTATGATTCAGAAAATCACAATGAAAAGCAGAAGATTTCAGAGCGCATGTTGAGCTGGCACATGGCATATGGACGGGCAGAGGATGTTGGTGCGCCAAATTATGATAAGGAAGTTTCTCACAACCACATTCCTCGTCTAACTAGTGGACAAGAGGTCTCCGGAGAATTTTCTGCGGCCTCACCTGAACGGCTTTCAATGGCTTCTCCTGGAGTTGGTGGAGGGAAGCGTGTCCACAATCTTCAATATTCATCTGACATTAACCAATCACCTAATATTAGAGGTGCGGATTCTGGATTGGGAAATGTAGCTTGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAGGATAAGAATGTAGTTCCAATGAGCACTGGTCAAGCTACCTCCGAGAGAGGGGCTGGAGATATTGATGCTAGTACAGATGTGCTTGTGGATGATTCCTTACTGAATGATGAAGCTCGGCAGCCTCTTTCCAGGAAGGTTTCTATTCCATCTTCTAGGATAAATCCATACCGTATGGTCATAGTTCTGCGGCTGGTTAtcctttgctttttcttgCATTATCGAATAACAAATCCAGTACCAAATGCATATGCATTGTGGTTAATATCAGTCATTTGTGAGATTTGGTTTGCCATGTCCTGGATATTGGATCAGTTCCCTAAGTGGCTCCCTGTGAACCGTGAAACGTATCTTGACAGGCTTGCATTGAGATATGACCGGGAAGGAGAACCATCACAGCTTGCAGCTGTTGACATCTTTGTCAGTACCGTGGACCCATTGAAGGAACCCCCTCTTGTGACTGCCAATACCGTACTCTCTATTCTTGCTGTTGATTATCCGGTTGACAAGGTCTCCTGCTATGTCTCTGATGATGGTGCTGCTATGCTGACATTTGAAGCTCTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCTTTCTGCAAGAAATATAACATTGAACCCCGGGCACCAGAATGGTACTTTACACAAAAGATTGATTACCTGAAGGATAAGGTTCAGCCATCATTTGTCAAAGAACGTAGGGCAATGAAGAGAGAATATGAAGAATTTAAAGTTCGTGTCAATGGACTTGTTGCAAAGGCACAGAAAGTTCCAGAAGAAGGATGGGTTATGCAAGATGGTACACCATGGCCTGGAAACAATACCAGAGACCATCCCGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGAAATGAACTTCCACGTTTGGTCTATGTTTCTCGTGAGAAGCGTCCAGGGTTCCAACATCACAAAAAGGCTGGTGCCATGAATGCACTTGTCCGAGTATCGGCCGTACTTACCAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTCGGAAAACATGTTTGCTATGTCCAGTTCCCACAGAGGTTCGATGGCATTGATAGGAACGATCGATATGCCAATCGTAACACAGTGTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCGGTCTATGTGGGTACAGGATGTGTCTTCAATAGAACTGCACTGTATGGTTATGAACCTCCTGTCAAACCCAAGCATAAAAAACCTGGGTTGTTGAATTCACTCTGTGGTGGCAGTCGAAAGAAGGGTTCAAAATCAAGCAAGGGCTCAGACAACAAAAAATCTAGCAAGAATATTGACCCGACAGTGCCGATCTTCAATCTAGAGGACATAGAAGAAGGAATGGAAGGTGCTGGTTTTGATGATGAGAAGTCGCTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCCGCTGTATTTGTCGCCTCTACACTCATGGAGAATGGCGGCGTTCCTCAGTCTGCTACACCAGAAACTCTTCTGAAGGAGGCCATTCATGTCATCAGCTGTGGTTATGAGGACAAAACAGAATGGGGAACCGAGATAGGATGGATCTATGGTTCTGTCACAGAAGATATTCTTACTGGATTTAAGATGCATGCTCGTGGTTGGCGGTCTATATACTGCATGCCGAAGCGCCCGGCCTTCAAAGGTTCTGCCCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTTCGATGGGCTTTAGGTTCCGTGGAAATTCTGCTAAGTAGACATTGCCCCATCTGGTATGGCTATAGTGGAAGGCTAAAATGGCTCGAGAGGTTCGCATATGTTAACACCACAATCTATCCAATCACTGCCATTCCTCTTCTCTTGTATTGTACTCTGCCTGCCGTCTGTCTCCTGACAAACAAGTTCATTATTCCCCAGATTAGTAACATTGCAAGTATATGgtttatctctctctttctttccatctTTGCTACCGGTATCCTAGAGATGAGGTGGAGCGGTGTTGGAATCGATGAGTGGTGGAGAAATGAACAATTTTGGGTTATTGGTGGTGTCTCAGCCCATCTTTTTGCTGTGTTCCAAGGTTTACTCAAAGTGCTAGCTGGTATTGACACAAATTTCACTGTTACCTCCAAGGCCTCAGACGAAGATGGAGACTTTGCAGAACTCTACTTGTTCAAATGGACAACCCTTCTGATCCCACCCACCACTCTACTCATCATAAACCTGGTCGGAGTCGTCGCCGGAATCTCCTACGCCATCAACAGCGGTTACCAATCGTGGGGTCCCCTGTTTGGGAAGCTTTTCTTTGCATTCTGGGTGATTATCCATCTTTATCCCTTCCTCAAGGGTCTCATGGGGCGCCAGAACAGAACGCCAACCATTGTGGTGGTTTGGTCCATTCTTCTTGCGtccattttctctctgttGTGGGTCAGAATTGATCCATTTACAACCAGAGTTACTGGCCCTGATGTTGAACAATGTGGAATCAACTGCTA 3224 0.4488 MESEEQAGAKPMTALGGQVCQICGDNVGKTVDGEPFIACHVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDREEDGGVDDGASDLNYDSENHNEKQKISERMLSWHMAYGRAEDVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAASPERLSMASPGVGGGKRVHNLQYSSDINQSPNIRGADSGLGNVAWKERVDGWKMKQDKNVVPMSTGQATSERGAGDIDASTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCFFLHYRITNPVPNAYALWLISVICEIWFAMSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYNIEPRAPEWYFTQKIDYLKDKVQPSFVKERRAMKREYEEFKVRVNGLVAKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKPKHKKPGLLNSLCGGSRKKGSKSSKGSDNKKSSKNIDPTVPIFNLEDIEEGMEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERFAYVNTTIYPITAIPLLLYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEQCGINC 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01280 1074 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Bva07g01280 1074 PANTHER CELLULOSE SYNTHASE 5 1074 - -
Bva07g01280 1074 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 1074 - -
Bva07g01280 1074 MobiDBLite consensus disorder prediction 76 104 - -
Bva07g01280 1074 Pfam Cellulose synthase 347 1067 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva07g01280 1074 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 467 638 IPR029044 -
Bva07g01280 1074 MobiDBLite consensus disorder prediction 643 680 - -
Bva07g01280 1074 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 888 IPR029044 -
Bva07g01280 1074 SUPERFAMILY RING/U-box 6 86 - -
Bva07g01280 1074 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Bva07g01280 1074 CDD mRING-HC-C4C4_CesA_plant 18 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01280 Bva-Chr7 13557325 13563907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01280 07 13557325 13563907 Bva07g01280 07 13557325 13563907 ECH