Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva07g01165 | ATGATGTACAATGATCCTCATCATCACCACCATcaacaacagcagcaacagcaacaACATTTTCACCATCCACAACCAGGTGGAGAATTCCACAGGGGACCTCCACCGCCGCAGCCAATGATGCGCCAGCCTTCTGCTTCCTCCACTAATATACCCTCAGAGTATCACCATCCCACTGGTGCGGGTGTTGGTCCTGGTGGCCCACCACCTCATTACGATGTTCATGCTGATAATTTTGCTgcaaaaagaatgagaaagctTACCCAAAGGAGGGCAGTTGATTATACAAGTCCTGTTGTGCGATATATACAGATTCGTATGTGGCAGCGAGATTCAAGGGATAGAACAGTATTGCAACCTACCCCTGCTGCAGCAATTGATATGTTGCCACCAGTTGCCTATTCAGACAATCCATCGACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTTAATAAAAACCGTTGCTCGATAAATCGGGTTCTGTGGACTCCAACAGGACGGCGCCTTATCACTGGCTCACAGAGTGGGGAATTTACTCTTTGGAATGGacaatcatttaattttgaaatgattCTTCAGGCCCATGATCAGCCAATCAGATCCATGGTCTGGAGTCACAACGACAACTGGATGGTATCTGGTGATGATGGAGGCTCCATAAAGTATTGGCAGAACAACATGAACAACGTGAAAGCCAATAAAACTGCTCATAAAGAATCAGTACGTGACTTAAGTTTTTGTAGGACAGATTTGAAGTTCTGTTCGTGCTCTGATGATACAACTGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGCGTTCATTGACTGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCTCTGTTAGTTTCAGGTGGGAAGGACAACCTTGTGAAACTTTGGGATGCTAAAATGGGGAAAGAGCTTTGTTCATTTCATGGTCACAAAAATACTGTTCTATGTGTCAAATGGAATCAAAATGGCAATTGGGTACTCACTGCTTCAAAGGATCAAATAATCAAGCTTTATGACATAAGGGCTATGAAGGAGCTTGAATCTTTCCGTGGACATCGGAAGGATGTTACTGCTTTGGCTTGGCATCCATTCCATGAAGAATACTTTGTCAGTGGAAGTTTTGATGGCTCAATATTCCATTGGCTCGTTGgGCATGAAACTCCACAAATTGAAATTCCCAATGCTCATGATAATAGTGTATGGGATCTTGCATGGCATCCTACTGGATACCTGCTTTGCAGTGGTAGCAATGACCACACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACTGGTCGTGATAGATTTAATATGGGTACACAAGGTTATGCTGAGCAAAATCCTTCTCTTGCTGGTCGTATGAGTGGTATTTTTGCTGTACCGGAGGGACCAACAACACCAGGACCATTTGCTCCAGGGTTGATTCGAAATGAGGGTACCATTCCAGGTGTTGGGGTTCCAATGCCTCTTTCGATTCCTTCACTTGATGCATCACAGGGGGAGCAGAAACCTCATCCTGGTTCAATGCCTTTGAGTGCTCCTCCTCTTCCACCAGGTCCACATCCCTCTCTTATTCCTGGTAATCAGCAGCAACCATACCAGCAGAATCCTCAACAGATCCCACAACACCAACACCAGACACTACCACAACAAATGGGTCCTTTATCTATGACTCCTAATATGCCACAACTACAGCATCCATCCCATTTGCCCTTGCTTCCTCATCCACATATGGCTCGCCCTCCACCTCAAATGCCCCCACTTGGAATGCCAGGGTCTATATCAATGCCTTCATCAGTGCCCACATCACATCCAATGCAAATGCCAGGACCAATGGGAATGCAAGGTGCAATGAATCAGATGGGTCCTCCGATGCCGCAAGGTCATTATGTGGGCATGAATCAAATGCATTCTGGATCCCTGCCCACAAGTGGAGGGCCACCTGTTGGAGGTTTCCCGGGAAACTTACCAAATATGCAGGGTCCGACAAATGCCGGTTACCCTCAAGGCGGTTCATTCAACAGACCACAAGGTGGACAAATGCCATTAATGCAAGGCTTCAATCCTTACCAGTCTGGAAATCAACCTGGAATGCCTCCTAACGCACAAGCAGGCCCCCAGTCACACTCTCAGACGCCTCAATA | 2183 | 0.4494 | MMYNDPHHHHHQQQQQQQQHFHHPQPGGEFHRGPPPPQPMMRQPSASSTNIPSEYHHPTGAGVGPGGPPPHYDVHADNFAAKRMRKLTQRRAVDYTSPVVRYIQIRMWQRDSRDRTVLQPTPAAAIDMLPPVAYSDNPSTSFAAKFVHTSLNKNRCSINRVLWTPTGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNDNWMVSGDDGGSIKYWQNNMNNVKANKTAHKESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKMGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSFDGSIFHWLVGHETPQIEIPNAHDNSVWDLAWHPTGYLLCSGSNDHTTKFWCRNRPGDTGRDRFNMGTQGYAEQNPSLAGRMSGIFAVPEGPTTPGPFAPGLIRNEGTIPGVGVPMPLSIPSLDASQGEQKPHPGSMPLSAPPLPPGPHPSLIPGNQQQPYQQNPQQIPQHQHQTLPQQMGPLSMTPNMPQLQHPSHLPLLPHPHMARPPPQMPPLGMPGSISMPSSVPTSHPMQMPGPMGMQGAMNQMGPPMPQGHYVGMNQMHSGSLPTSGGPPVGGFPGNLPNMQGPTNAGYPQGGSFNRPQGGQMPLMQGFNPYQSGNQPGMPPNAQAGPQSHSQTPQ | 727 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva07g01165 | 727 | MobiDBLite | consensus disorder prediction | 539 | 575 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 361 | 393 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 235 | 267 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 319 | 360 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 405 | 436 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | CDD | WD40 | 155 | 436 | - | - | |
| Bva07g01165 | 727 | SUPERFAMILY | WD40 repeat-like | 147 | 436 | IPR036322 | GO:0005515 | |
| Bva07g01165 | 727 | Gene3D | - | 310 | 447 | IPR015943 | GO:0005515 | |
| Bva07g01165 | 727 | PANTHER | WD40 REPEAT PROTEIN | 73 | 722 | IPR045245 | GO:0031124 | |
| Bva07g01165 | 727 | MobiDBLite | consensus disorder prediction | 521 | 538 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 235 | 276 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 151 | 183 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 193 | 225 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 405 | 436 | - | - | |
| Bva07g01165 | 727 | Gene3D | - | 103 | 309 | IPR015943 | GO:0005515 | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 319 | 353 | - | - | |
| Bva07g01165 | 727 | MobiDBLite | consensus disorder prediction | 670 | 727 | - | - | |
| Bva07g01165 | 727 | Pfam | WD domain, G-beta repeat | 405 | 436 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | Pfam | WD domain, G-beta repeat | 357 | 393 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | Pfam | WD domain, G-beta repeat | 236 | 267 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | Pfam | WD domain, G-beta repeat | 191 | 224 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | Pfam | WD domain, G-beta repeat | 313 | 351 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | Pfam | WD domain, G-beta repeat | 272 | 309 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | MobiDBLite | consensus disorder prediction | 652 | 727 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 277 | 318 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 277 | 309 | - | - | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 193 | 225 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | MobiDBLite | consensus disorder prediction | 503 | 575 | - | - | |
| Bva07g01165 | 727 | SMART | WD40_4 | 312 | 351 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | SMART | WD40_4 | 270 | 309 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | SMART | WD40_4 | 139 | 183 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | SMART | WD40_4 | 397 | 437 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | SMART | WD40_4 | 354 | 394 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | SMART | WD40_4 | 186 | 225 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | SMART | WD40_4 | 228 | 267 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 361 | 393 | IPR001680 | GO:0005515 | |
| Bva07g01165 | 727 | PRINTS | G protein beta WD-40 repeat signature | 338 | 352 | IPR020472 | - | |
| Bva07g01165 | 727 | PRINTS | G protein beta WD-40 repeat signature | 254 | 268 | IPR020472 | - | |
| Bva07g01165 | 727 | PRINTS | G protein beta WD-40 repeat signature | 296 | 310 | IPR020472 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva07g01165 | Bva-Chr7 | 12829866 | 12839442 | Dispersed/Wgd |