Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01050 ATGGAAAGAGGATCAGATCCTTCTTCAAGTTCCATTGATAAGACCAAGGTTTTAGATGTTAAACCTCTGCGTAGTTTGGCGCCAGTGTTCCCAACGGCTCCTCCTCATCCTTCTGggtcttttccatttttcccaTTTGGACCTCAAGCATCCCATGGTGTCAATCAGAACACTCCTACCTCTGGTGCCATACCAGCTCCAATTAGGTCATATAGGAGACCCGATGGGGAGGGGTTAAATGAAGGGTTGCCTGTTAAACCGAAGCGTGCACGCAAATCCAAGTCATCTGAAAAAAAGCCTAAGAAAAAAAGTCAGGATCCAGGAAGTGATTTAAGCTCTTTGTTTGGTATTAGCCTAGCCCAAAAGGAAGATGGTGACGGGGAAGTGGTTAATGTTGTACTCATAGCTTTTGATGCAATTCGAAGAAGGCTTAGCCAACTTGAAGATGCCAAGGAATTGAGTACAGGGCTAATCAAGCGTGCAGACTTGAAATCTGGGAATATTTTGATGACCAAAGGGATTCGAACTAACATGAGGAAGAGAATAGGAGCAGTGCCTGGGATTGAGATTGgggacattttctttttccgaATGGAATTATGTGTTGTGGGGTTGCATGCTCCTTCCATGGGTGGAATTGACTACATGACTCCCAGGGGTGAGTCGGAGGAGGAACCTCAAGCTGTAAGCATTGTTTCGTCTGGAGGATATGATGATGATGTAGATGACAGTGATGTTTTGATTTATACTGGTCAGGGTGGGAATTCCAACAAGAAAGATAAGGAGGTGGCTGATCAGAAGCTTGAAAGGGGTAATCTTGCTTTGGAGGTAAGTTCACGGCGTCACAATGAAGTAAGGGTCATCAGGGGCATGAGAGATGCTGCAAATCCAAGCTTAAAGGTCTATGTCTATGATGGTCTGTATAAAATCCAAGAGTCATGGAGAGAAAGGGGAAAATCTGGTGGCGGTGTATTTAAATACAAGTTGGTGAGAATGCCTGGACAGCACAGTGCCTTTGCTGTTTGGAAATCAGTTCAGAAGTGGAAAGAAGGCAACCCTTCTAGGAATGGATTTATTCTTGCAGACCTCTCCTCAGGAGCTGAGAAGTTCCCTATATCACTTGTTAATGATGTTGATTATGAGAAGGGGCCTGctcattttacttattctcAATCCCTCAAGCATCCAAAATCATTCAGTTTAGTACAGACTTCTTCTACCTGTAACTGTCACAGTGCATGTGTCCCTGGCGATTTAAACTGCTCTTGCATTCGGAGAAATGAAGGTGATTTTCCCTATACTGGTAATGGCATTCTAGTGAGTCGGAGGCCGTTGGTTCATGAATGTGGCCCCGCATGTAAATGTTTTCCAAACTGCAAAAATCGAGCATCCCAGACTGGTTTGAAGTTTCAAATGGAAGtgttcaaaacaaataatagagGATGGGGTCTTCGAACACTTGATCCTATTCGTGCTGGTACTTTCGTTTGTGAGTATGCAGGAGAAGTTATTGACAGATCCAAGATAAATCAAAATGGAGAGGGAGATGAGTATGTTTTTGACACAACCCGTAATTATAGTTCATTCAAATGGAATTATGAACCTAGGTTACTTGAAGAAGTGAGTTCAAATGACTCTAGTGAGGATCACACTATTCCATCTCTAATTATAAGTGCCAAGAAGGTTGGCAATGTGGCTAGATTCATGAACCATAGTTGCACCCCAAATGTTTTCTGGCAGCCAGTCTTATATGAAGAGAATAACCAATCCTTCCTTCATATTGCCTTTTTTGCCCTTAGACACGTCCCCCCAATGACAGAGTTGACGTATGATTATGGAGTTTCCCGTTCCGTTCATACTGGCAGTAGCAGTACGCCCAAGGGGCAAAAGAAATGCTTATGTGGATCATCAAAGTGCCGGGGTTCTTTCGGTTG 1934 0.4204 MERGSDPSSSSIDKTKVLDVKPLRSLAPVFPTAPPHPSGSFPFFPFGPQASHGVNQNTPTSGAIPAPIRSYRRPDGEGLNEGLPVKPKRARKSKSSEKKPKKKSQDPGSDLSSLFGISLAQKEDGDGEVVNVVLIAFDAIRRRLSQLEDAKELSTGLIKRADLKSGNILMTKGIRTNMRKRIGAVPGIEIGDIFFFRMELCVVGLHAPSMGGIDYMTPRGESEEEPQAVSIVSSGGYDDDVDDSDVLIYTGQGGNSNKKDKEVADQKLERGNLALEVSSRRHNEVRVIRGMRDAANPSLKVYVYDGLYKIQESWRERGKSGGGVFKYKLVRMPGQHSAFAVWKSVQKWKEGNPSRNGFILADLSSGAEKFPISLVNDVDYEKGPAHFTYSQSLKHPKSFSLVQTSSTCNCHSACVPGDLNCSCIRRNEGDFPYTGNGILVSRRPLVHECGPACKCFPNCKNRASQTGLKFQMEVFKTNNRGWGLRTLDPIRAGTFVCEYAGEVIDRSKINQNGEGDEYVFDTTRNYSSFKWNYEPRLLEEVSSNDSSEDHTIPSLIISAKKVGNVARFMNHSCTPNVFWQPVLYEENNQSFLHIAFFALRHVPPMTELTYDYGVSRSVHTGSSSTPKGQKKCLCGSSKCRGSFG 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01050 644 SUPERFAMILY SET domain 370 641 IPR046341 -
Bva07g01050 644 Gene3D SET domain 353 643 IPR046341 -
Bva07g01050 644 SMART G9a_1 178 335 IPR003105 -
Bva07g01050 644 ProSiteProfiles Post-SET domain profile. 628 644 IPR003616 -
Bva07g01050 644 MobiDBLite consensus disorder prediction 28 42 - -
Bva07g01050 644 SMART set_7 470 619 IPR001214 GO:0005515
Bva07g01050 644 MobiDBLite consensus disorder prediction 1 110 - -
Bva07g01050 644 ProSiteProfiles SET domain profile. 470 613 IPR001214 GO:0005515
Bva07g01050 644 ProSiteProfiles YDG domain profile. 183 331 IPR003105 -
Bva07g01050 644 Pfam SAD/SRA domain 182 335 IPR003105 -
Bva07g01050 644 Pfam Pre-SET motif 364 462 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva07g01050 644 Pfam SET domain 481 613 IPR001214 GO:0005515
Bva07g01050 644 ProSiteProfiles Pre-SET domain profile. 406 467 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva07g01050 644 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 10 642 - -
Bva07g01050 644 SUPERFAMILY PUA domain-like 167 353 IPR015947 -
Bva07g01050 644 SMART preset_2 360 454 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bva07g01050 644 Gene3D - 166 350 IPR036987 -
Bva07g01050 644 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 644 IPR025794 GO:0016571
Bva07g01050 644 MobiDBLite consensus disorder prediction 50 64 - -
Bva07g01050 644 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 10 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01050 Bva-Chr7 12117204 12120790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01050 13 644 Su(var)3-9 homologs AT5G04940 53.949 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva07g01050 SAD_SRA 8.5e-53 CL0178