Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01046 ATGTCTCTCTTCAAATCCTATGGCAAAGTTGATGAAGCCGAGCAGGCCAGGTTGGAGGCACAGCGAAAGACGCGAAAGAGGATCATAATCATAGGCTTGTCCTCTGTGATCCTCGTTGGTGTTGTTCTTGCTGCTGTGTTTGTAACCATTAGTGCTCGCAATTCTCATGACAACTCGAAAGAGGGCAATGGTGATGCTGTTTCGGCTGCGGTTAGAGCCATTTGCAATGTGACATTGTACAAGGAATCGTGTTATAGCAGCCTTGGCCTTCTTGTTCAGCCAGGGAAGATTCAGCCAGAGGAGTTGTTCAAGTTGGCAATTGGTGTGGCTTTGACTGAAGTGTCCAAAGCAGGTCAGAATTTCTATGGATTTTTCAAAGGAGTGACTGATAACAGGACCAAAGAAGCTTTGGATAATTGTGGGGAGCTTCTTGGTCTAGCTATTGATCATCTGAATAGCTCATTGTCTTCTGGTGAAGTTTCTTCCATCCATGACGCTTTTGAGGATATTCAAACGTGGTTGAGTGCTGCAGGTACTTACCAGCAGACATGCATTGATGGCTTGGAGGAAGTGAAAGAAGATTTGAAGAACAGCGTTGTGAACTACCTCAAAAATTCTACTGAGTTCACCAGTAACAGTCTTGCAATCATTACTTCAATCAGCAATGCTGCGAGCTCCTTGAACCTGAGGCGATTGCTGAGCTTACCCTATCATCATGATGAAGCACCAAAGTGGCTTCGTTCAGAAGATCGCAGGTTACTTGGAGAGGATTTGAGGAGTAAAGCTAATATCATTGTGGCACAAGATGGCACtggaaaatacaaaacaatTGCTGATGCACTTAAGCATGTCCCTGAGAAAAGTAATAACAGAACAGTGATATATGTGAAGAAAGGGGTTTACTATGAAAATTTGAGGGTAGAGAAGACCAAATGGAATGTGATGATCATCGGTGATGGTATGACTAGAACAATTGTCTCTGGCAGCCTTAACTTTGTTGATGGCACCCCAACATTTTCAACTGCAACTTTTGCTGTGTttggaagaaattttattgctAGGGGTATGGGCTTTCGCAACACAGCAGGTCCACAGAAGCACCAGGCAGTGGCACTAATGACAAGTGCAGATCAGGCAGTTTACTACCGCTGCCACATTGATGCATTCCAAGACACTCTCTATGCTCACGCCAATCGCCAATTCTACCGCGAATGCAACATATACGGCACAGTCGATTTCATCTTCGGCAACTCAGCAGTTGTGATCCAAAACTGCAGCATCATGCCCAAAATGCCCATGCAGGGCCAGCAGAACACGATCACAGCTCAGGGCAAAGTTGACCCAAATCAGAACACAGGGATTTCAATCCAGAAATGCAACATTGCACCCTCAGGGAACTTGAGTTCTGTGAGGACATACCTTGGGAGGCCATGGAAGAATTACTCAACAACTGTGTACATGCAGTCCACAATGGCAAGCTTCATTGATCCAGCCGGTTGGATGCCATGGGTGGGAAACTCAGCACCAGACACCATTTTCTATGCAGAGGTTCAGAATGTTGGGCCTGGTGCTGCAACTAATAATAGGGTAAAGTGGAAGGGTTTGAGAGCCATTTCTGCTAGACAAACAAGCAAATTTACTGTGAAGGCTTTTCTACAAGGAGATAGATGGATTCCGGCATCTGGGGCACCCTATAGTCCTGATCTTTG 1709 0.447 MSLFKSYGKVDEAEQARLEAQRKTRKRIIIIGLSSVILVGVVLAAVFVTISARNSHDNSKEGNGDAVSAAVRAICNVTLYKESCYSSLGLLVQPGKIQPEELFKLAIGVALTEVSKAGQNFYGFFKGVTDNRTKEALDNCGELLGLAIDHLNSSLSSGEVSSIHDAFEDIQTWLSAAGTYQQTCIDGLEEVKEDLKNSVVNYLKNSTEFTSNSLAIITSISNAASSLNLRRLLSLPYHHDEAPKWLRSEDRRLLGEDLRSKANIIVAQDGTGKYKTIADALKHVPEKSNNRTVIYVKKGVYYENLRVEKTKWNVMIIGDGMTRTIVSGSLNFVDGTPTFSTATFAVFGRNFIARGMGFRNTAGPQKHQAVALMTSADQAVYYRCHIDAFQDTLYAHANRQFYRECNIYGTVDFIFGNSAVVIQNCSIMPKMPMQGQQNTITAQGKVDPNQNTGISIQKCNIAPSGNLSSVRTYLGRPWKNYSTTVYMQSTMASFIDPAGWMPWVGNSAPDTIFYAEVQNVGPGAATNNRVKWKGLRAISARQTSKFTVKAFLQGDRWIPASGAPYSPDL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01046 569 Pfam Plant invertase/pectin methylesterase inhibitor 70 216 IPR006501 GO:0004857
Bva07g01046 569 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Bva07g01046 569 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 221 IPR035513 -
Bva07g01046 569 CDD PMEI-like_3 73 222 - -
Bva07g01046 569 TIGRFAM PME_inhib: pectinesterase inhibitor domain 42 219 IPR006501 GO:0004857
Bva07g01046 569 SUPERFAMILY Pectin lyase-like 260 568 IPR011050 -
Bva07g01046 569 PANTHER PECTINESTERASE 5 566 - -
Bva07g01046 569 PANTHER PECTINESTERASE 5 566 - -
Bva07g01046 569 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 222 IPR035513 -
Bva07g01046 569 Gene3D - 258 569 IPR012334 -
Bva07g01046 569 Pfam Pectinesterase 263 555 IPR000070 GO:0030599|GO:0042545
Bva07g01046 569 Coils Coil 185 205 - -
Bva07g01046 569 SMART PMEI_2 66 216 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01046 Bva-Chr7 12092220 12094838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01046 7 569 Carbohydrate Esterase AT3G10710 55.052 0.0 655