Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01045 ATGTCACCTCCATCACTTTCCCTCCTTCCCTTCCTTtgcttcctcttcctctttctcccATTATTGCTTGCCCAAGCTCCAACCCCACAAGCCCCACCACCTCAAAACACTTCTTCTCCTCCACCTTCTTCCTCTGCAGCATGCAAATCCACATTATACCCTAAACTATGTCGTTCCATTCTCTCTGCCATACGATCCTCGCCGTCGGATCCCTATGGCTACGGCAAGCTTTCCATCAAGGAAAGCCTCAAACAAGCCAGGAAACTGGCCAAGGTGTTTGATGACTTCCTCCAACGGCGTAGCTCCTCTTCCTTTAACCGCGCTGAGGTTGCGGCATTGGGTGACTGCAGGGAACTTAACCAGTTCAATGTGGGTTACTTGGAGACCATATCGGAGGAGCTGAAGTCCGCCGCCGGCGACCAGCAAGAGCTGTTGCAGAAAATAGAGACTTACCTGAGCGCCGTCGCGACTAACCATTATACTTGCTATGATGGGTTGGCGGTGATTAAGAGCAGCATTGCCAATGCACTTGCAGTGCCGTTGAGGGATTTGTCTGAGTTGTATAGTATTTCACTTGGGTTGGTGACTGATGCTGTAAATCGGAACCTCAGGAAAAGCAAGACACAAAAACATGCTCTTCCTACTAAGACCTACAAAGTCAGGCAACCATTGCAGAAGCTCATTAAGTTTCTTCGGAAGAAGTATAGCTGTGAGGAATCTTCCAACTGCACCAGGAATCAAAGGACTCTTAAAGAAGAAAGCGCAAGCCATGGGATTCTATTGAAGGACTATGTGATTGTGAGCCCATATGGAACAGACAACTTCACTTCCATTGGAGAAGCCATTGCTGCTGCACCCAACAACTCAAAACCAGAAGATGGGTATTTCCTTCTCTATGCCAGAGAAGCAGTGTACGAGGAGTATGTCATTGTTCCcagagagaagaagaacatCTTGCTCATAGGAGATGGCATCAACAAGACAATCATCACAGGGAACCATAGTGTCGTAGATGGTTGGACCACTTTCAATTCTTCCACCTTTGCTGTTGTTGGAGAAAGGTTTATAGCAGTGGATGTTACATTCAGAAACACAGCAGGACCAGAAAAGCACCAAGCAGTGGCTGTGCGGAACAACGCTGACCTCTCAACATTCTACCGTTGCAGTTTTGAAGGCTACCAAGACACTCTATATGTTCACTCCCTGAGACAATTCTATAGAGAATGTGACATATATGGCACTGTGGATTTCATCTTTGGCAATGCTGCTGTGGTCTTCCAAAGCTGCCACATGCATGCAAGAAAACCATTGCCGTTTCAGAAGAATGCAGTGACAGCACAAGGTAGAACAGACCCTAATCAGAACACTGGCATCTCCATCCAAAACTGCACCATTGAAGCTGCACCAGACTTGGAAATGGACTTGAACTTCACCTCGAATTACTTGGGTCGTCCGTGGAAGGAATACTCGAGGACTGTCTTCATGGAATCATACATTGGAGATTTGATTCAACCAGCAGGGTTTTTAGAGTGGAATGGCACGTTTGGGTTAGACACTCTTTTCTATGGTGAGTTCGATAATCATGGACCTGGTGCTAAGACTGATCAGAGAGTGAAATGGCCTGGTTATAGTTTGTTGAATGTTACTCAAGTTCTTAACTTTACTGTGCTTAATTTTACCGGAAATTTATGGTTGGATGACGCAGATGTACCCTACATCGGAGGATTATTAGGTTA 1736 0.4499 MSPPSLSLLPFLCFLFLFLPLLLAQAPTPQAPPPQNTSSPPPSSSAACKSTLYPKLCRSILSAIRSSPSDPYGYGKLSIKESLKQARKLAKVFDDFLQRRSSSSFNRAEVAALGDCRELNQFNVGYLETISEELKSAAGDQQELLQKIETYLSAVATNHYTCYDGLAVIKSSIANALAVPLRDLSELYSISLGLVTDAVNRNLRKSKTQKHALPTKTYKVRQPLQKLIKFLRKKYSCEESSNCTRNQRTLKEESASHGILLKDYVIVSPYGTDNFTSIGEAIAAAPNNSKPEDGYFLLYAREAVYEEYVIVPREKKNILLIGDGINKTIITGNHSVVDGWTTFNSSTFAVVGERFIAVDVTFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCHMHARKPLPFQKNAVTAQGRTDPNQNTGISIQNCTIEAAPDLEMDLNFTSNYLGRPWKEYSRTVFMESYIGDLIQPAGFLEWNGTFGLDTLFYGEFDNHGPGAKTDQRVKWPGYSLLNVTQVLNFTVLNFTGNLWLDDADVPYIGGLLG 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01045 578 PANTHER PECTINESTERASE 10 576 - -
Bva07g01045 578 SUPERFAMILY Pectin lyase-like 262 574 IPR011050 -
Bva07g01045 578 SMART PMEI_2 39 194 IPR006501 GO:0004857
Bva07g01045 578 CDD PMEI-like_3 46 196 - -
Bva07g01045 578 PANTHER PECTINESTERASE 10 576 - -
Bva07g01045 578 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 196 IPR035513 -
Bva07g01045 578 Coils Coil 127 147 - -
Bva07g01045 578 Pfam Pectinesterase 265 560 IPR000070 GO:0030599|GO:0042545
Bva07g01045 578 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
Bva07g01045 578 Gene3D - 263 578 IPR012334 -
Bva07g01045 578 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 195 IPR006501 GO:0004857
Bva07g01045 578 Pfam Plant invertase/pectin methylesterase inhibitor 46 193 IPR006501 GO:0004857
Bva07g01045 578 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 198 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01045 Bva-Chr7 12086867 12091575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01045 7 577 Carbohydrate Esterase AT3G10720 57.307 0.0 704