Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01036 ATGGATGCTGTAGCAATAGAAGATGGAGAAAACAGTGATAGACTTGCAACAGAAAATATTCGGCCTGATAATGGTCAGAGACAGAATGCAACAGTAAACTTAGCTGAGAGAGAAGTAATTAATGTGGACAGTGATGCAAATCTGAAACCACAAGTGGGCATGATATTTGAATCAGAAGATGCTGCGAAAACTTTTTATGATGCATATGCCAGGCATAACGGTTTCAGCACCCAGGTTGGTCAGTTCAGTCGTACTAAGCCTGATGGTCCAATTGTAACTTGGGACTTTGCTTGTTCTAGAGAggtatataaaaagaagactGTAGAAAGTTGCAATGCGTTGCTTAGGATAGAGagaaaagatgaaaacaaCTGGATAGTGACAAAATTTGTTGAGGATCATAACCATTCCCTGACATCCCCTGGTAAGGTGCACTACTTGCGACCCCGTAGGCATTTTGCAGGTGCTACCAGGAATGTTTCTGAGATAATGGATGCCTCTACTGATACTTATGTTTCCATGGATGGTAACCATATATCTCACGATCCAAATTGTTTGATCAGGAGCTCCTCTCCAGTGGAGTGGAACCACCCAGCCAGAAATGTTGGGCCTTTTACTTATGTTAGACCTTCTGGAAAGAGAACCCTTGGAAGAAATGCCCaaaatcttttgaattattttaagaagatGCAGGCAGAAAACCCTGGCTTCTATTATGCAATACAGCTTGATGATGATAACCGCATGACTAATGTATTTTGGGCTGATGCAAGGTCGAGAGCAGCTTATAATTACTTTGGTGATGCAGTAGTTTTTGACACATTGTACAGACCAAATCAATACCAAGTCCCATTTGCTCCCTTTACAGGTGTCAATCATCATGGTCAGCTGGTTTTGTTTGGCTGTGCGTTAATTTTGGATGAATCTGAGTCTTCTTTTACTTGGCTGTTCAGGACATGGCTAACTGCAATGAATGATCGACCACCTGTTTCCATAACCACGGACCAGGATCGGGCAATACAAGCATCTGTTGCCCAGGTCTTTCCAGAAACTCACCACTGTATTTGTAAGTGGCACATTTTGAGGGAAGGTCAAGAAAGATTGGCGCACATTTACCTTGTTCATCCTTCTTTCTACGGAGAGCTATATAGCTGCATCAATTTCTCCGAAACCATTGATGATTTTGAATCATCTTGGCAATCTCTCCTAGATAAATATGATCTGAGGAAAAATGAGTGGCTTCAGGCTGTGTATAATGCTCGCCAACAGTGGGCCCCTGTTTATTTCCGTGGAACTTTTTTTGCTTCACTTTTGTCTAACCATGGAGTTAGCTCCTTTTTTGATGGCTATGTGAATCAACAGACGACCCTACCTCTTTTTTATAAGCAGTATGAAAGTGCTCTAGAACATtctttggaaaaagaaatagaagcagATAATGATACAATTTGCACCACACCAGTGTTAAAGACTCCATCACCAATGGAAAAACAAGCTGCAAATGTGTACACCAAGAGGATTTTTGCAGTGTTTCAGAAGGAATTGGTGGAAACTTTTGTGTATACTGCAAATATTATTGAGAATGATGGATTAGTCAATAAATACAGGGttgtaaaatatgaacatGATCACAAAGCATACATAGTCACTTTAGATCTTTCTGAACTGAAAGCAAATTGCAGCTGTCAGATGTTTGAATACTCAGGCATTCTTTGTAGGCATATATTGACTGTCTTCACTGTTACAAACGTTCTTACCCTTCCATCACATTACATTTTGAAACGCTGGACAAGGAATGCAAAATCCAGCATTGGATCAGATGAACAAATTCCAGATGCACACGTTATTGAAACTCTCACATCACgtttcaataatttatgcCGAGAAGCCATTAAACTTGCAGAAGAAGGGGCAGTAGGCTTGGAGACATATAATGCAGCAATGGATGCTTTAAGAGAGGTTCAGAAAAAGGTTGCATTGGTGAAGAAAAATGTTGCAAAAGTCACACCTCCAAGCTCTCAGGGCAATGGAAGTAGTCAGGAAGACAACAGCAAGAAGAGCCCCTCATTAAGTTCTGAAGTGGCCCCATCATTATGGCCCTGGCAAGATTCAGTTTCACATCGTTTTAATCTGAATGACATTGGGCTTCCTGTTGCTGATCTGAATCAGCCCAGTATGGCTCCTGTTTCTATTCACCGTGAGCCTGGCCCAGATAACAATGTTGTCCTTACTTGTTTTAAGGCTATGACTTGGgtcatagaaaataagaattcaaCCACGCCTGGTAAAGTTGCAGTCGTCAACTTGAAGCTGCAAGACTATGGCAAGAATCCTTCTGGGGAGAAAGAAGTGCAATTTAGGGTGACAAGGGTCACCTTGGAGCCTATGTTGAAATCTATGGCTTACATCAGTCAGCAGCTCTCTACACCTATCAATAGAGTTGCTGTCATCAATCTGAAGCTCCAGGATACAAAGACAACTAATGGGGAAACAGAGGTGAAATTTCAAGTTTCCAGAGATACACTAAGTTCCATGCTGAGATCCATGGCCTACATCCAGGAGCAGCTATG 2570 0.3992 MDAVAIEDGENSDRLATENIRPDNGQRQNATVNLAEREVINVDSDANLKPQVGMIFESEDAAKTFYDAYARHNGFSTQVGQFSRTKPDGPIVTWDFACSREVYKKKTVESCNALLRIERKDENNWIVTKFVEDHNHSLTSPGKVHYLRPRRHFAGATRNVSEIMDASTDTYVSMDGNHISHDPNCLIRSSSPVEWNHPARNVGPFTYVRPSGKRTLGRNAQNLLNYFKKMQAENPGFYYAIQLDDDNRMTNVFWADARSRAAYNYFGDAVVFDTLYRPNQYQVPFAPFTGVNHHGQLVLFGCALILDESESSFTWLFRTWLTAMNDRPPVSITTDQDRAIQASVAQVFPETHHCICKWHILREGQERLAHIYLVHPSFYGELYSCINFSETIDDFESSWQSLLDKYDLRKNEWLQAVYNARQQWAPVYFRGTFFASLLSNHGVSSFFDGYVNQQTTLPLFYKQYESALEHSLEKEIEADNDTICTTPVLKTPSPMEKQAANVYTKRIFAVFQKELVETFVYTANIIENDGLVNKYRVVKYEHDHKAYIVTLDLSELKANCSCQMFEYSGILCRHILTVFTVTNVLTLPSHYILKRWTRNAKSSIGSDEQIPDAHVIETLTSRFNNLCREAIKLAEEGAVGLETYNAAMDALREVQKKVALVKKNVAKVTPPSSQGNGSSQEDNSKKSPSLSSEVAPSLWPWQDSVSHRFNLNDIGLPVADLNQPSMAPVSIHREPGPDNNVVLTCFKAMTWVIENKNSTTPGKVAVVNLKLQDYGKNPSGEKEVQFRVTRVTLEPMLKSMAYISQQLSTPINRVAVINLKLQDTKTTNGETEVKFQVSRDTLSSMLRSMAYIQEQL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01036 856 MobiDBLite consensus disorder prediction 667 694 - -
Bva07g01036 856 SMART 26again6 558 585 IPR006564 GO:0008270
Bva07g01036 856 MobiDBLite consensus disorder prediction 1 25 - -
Bva07g01036 856 Pfam SWIM zinc finger 547 581 IPR007527 GO:0008270
Bva07g01036 856 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 39 800 - -
Bva07g01036 856 ProSiteProfiles Zinc finger SWIM-type profile. 547 583 IPR007527 GO:0008270
Bva07g01036 856 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 800 IPR031052 GO:0006355
Bva07g01036 856 Pfam MULE transposase domain 270 362 IPR018289 -
Bva07g01036 856 Pfam FAR1 DNA-binding domain 64 139 IPR004330 -
Bva07g01036 856 MobiDBLite consensus disorder prediction 665 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01036 Bva-Chr7 12015768 12022220 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva07g01036 MULE 5.6e-27 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01036 07 12015768 12022220 Bva09g01524 09 8850221 8856157 ECH
Bva07g01036 07 12015768 12022220 Bva07g01036 07 12015768 12022220 ECH