LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva07g01011	ATGGTGATGGCAAAACCAGTTTTTCTTTCCCATGTTCTTCTTCTAATCTTAATCTTGTTTGTGGCTATTCGCCATTCACAGCAGTTAACACCATCTCAATCTCAGGTCCTTTTGAATTTCCAGCAGCTTCTTGGGTACCCATCTGCTCTAACCAGCTTCAGCTTCACCTCAGACTTCTGCAACATTGAGCCCACCCCCTATTTGACGATAGGCTGCTATGAAGGAAACATAACCCAGCTGCATGTTATTGGCAACAATGGAGTGCCTCCATTGcctcaaaacttctccacatactCTCTGTTTGCCACACTAGGTAGTCTTTCTAACTTGAAAGTTCTCTCCTTGGTGTCTCTGGGTATCTGGGGTCCCCTTCCTGGAAGCATTGCCCAGTTAGGCTCTCTGGAAATCCTTAACGTTAGCTCAAATCACTTGGATGGAGCCATTCCAGAGCAACTTTCGTACTTGAGGAACTTGCAGTCTCTGGTGCTTGATGACAACAATTTCTCTGGTGAAATCCCCAGCTGGGTTGGTTCACTTCAAGGTTTGGCTGTGCTGAGTTTGAAGAACAATCTTCTAAGTGGGTCTCTGCCAACTTCAGTAAATGCTCTTAAAACTCTAAGAATATTAGCTCTGTCAAATAACAAGTTATCTGGAGAACTACCTCGTCTTGGGAATTTGACAAACCTTCAAGTTTTTGACCtggaaaacaacaaatttgggCCTCATTTTCCTTCCCTGCCCATTAGGTTGATTACCCTGGTGCTTAGAAATAACAGCTTTGGGTTTGGTATCCCTTCTGGTTTGAAGTCCTATTATCAGCTTCAAAAATTGGACCTTTCATTGAATGGATTTGTGGGTCCATTTCTTCCATCCTTACTTTCACTTCCTTCGATTAATTATCTTgatatttcagaaaataaatttactggGACGCTTTTCAGTAACTTATCTTGCAATGCTGAGCTGCTTTTTGTGaatttatcatcaaatctTTTGAAAGGGGAGCTTCCTACTTGTTTAAAGCCAAAGACTAGGATTGTTTCCTATGCTAGAAATTGTTTATCAGATGAAGATCAGCATCAGCGCCCTCCCAATTTCTGCCAAACTGAAGCTCTGGCGGTAACAATCATACCCCATGAACGAAAACACAAGGAATCAAGTGCTAACCCAGTTCTTATATCAACTATGGGAGGTATTTTTGGAGGAATCCTCATTGTTGGAGTGGTTTTCTTGGTCATCAACCGGGTACATAACAAACAAGCTGTGGAAATACCTGCAAAATCCACATTGGAAGATGCTATCAGCAAGGAACATGACAAACAAGAAGAGACAACACCTAAAAGGTCCATGATGGAGCATGTCATCAGCGGAATGCCTAGCAAGCAAGCTGTGAGAACATTTCGAAAGTCCATAATGGAGAATGTTATCAGACGGGTAAAATTCAAACATGTTGCAAAAACAACTAAAAGGTCCATAATAGAGCGTGCCTCATCAGTCAACACAGCAAAACTACTCACAGATGCAAGGTATATTTCACTGACAATGAAGATGGGAGACAGCCTTCCTGCTTACAGGACCTTTGCTTTGGATGAACTAAAGGAAgctacaaataattttgatgcaTCAGGTTTCATTAGTGAAGATTCACATGGTCAGATATACAAAGGCGCTCTCTCTGATGGAACTTCTATTGCTATCAGAagtttgaaaatgagaaagagacATAGTCCTCAGACCTATATGCACCATATTGAGTTGATATCAAAACTCAGGCATTCACACTTAGTTAGTGCTCTTGGACATTGCTTTGAGTTCAACCAGGATGATTCCAATGTCAGCAgtatatttctcatatttgaGTTTGTTCCAAACAGGAGTTTAAGGGACTGCGTATCTGGGTCCTCTCAAGATAAGCTTTCTTGGACACACAGAATAGTAGCTGCAATTGGAGTGGTGAAAGGCATTCAATTTCTGCACACAGGGACAGTGCCTGGACTATATTCAAATAATCTGAAGATAACAGATATTCTAATGGATAATAGTCTTAACGTTAAAATCAGCAGTTATAATCTACCACTATTGGCTGATAGCAAGAGAATGGTGGGAACTGGCACTTTTGGAACAAAAGGAAATGTCCAAACAAGGATAAAGGATGGGGACAAGAATGATGTTTATGATATTGGAGTAATCTTATTAGAAATAATTCTGGGTCGACCAATCATGTTCCATAATGAAGTTGGAACTCTAAAAGATCttGTACAGGTAAGCATAACAACTGACGATATAGGGAGGAGAAGTATTGTTGATCCAGCAGTTCATAAGGAATGCTCAGATCAATCACTGAAGACAATGATGGAGATATGTGTAAGGTGTCTGTCTAGTGAGCCAAGTGATAGACCTTCTGTGGAAGATATTCTCTGGAATCTGCATTTTGCAGCACAGGTTCAGCATTCATGGAGACGAGATTCCAGCGATAATAGAGAGTCACCTGCTTTATGCTCCCGGGAGATGCAAGAACTTCGACTTGCTTG	2531	0.3927	MVMAKPVFLSHVLLLILILFVAIRHSQQLTPSQSQVLLNFQQLLGYPSALTSFSFTSDFCNIEPTPYLTIGCYEGNITQLHVIGNNGVPPLPQNFSTYSLFATLGSLSNLKVLSLVSLGIWGPLPGSIAQLGSLEILNVSSNHLDGAIPEQLSYLRNLQSLVLDDNNFSGEIPSWVGSLQGLAVLSLKNNLLSGSLPTSVNALKTLRILALSNNKLSGELPRLGNLTNLQVFDLENNKFGPHFPSLPIRLITLVLRNNSFGFGIPSGLKSYYQLQKLDLSLNGFVGPFLPSLLSLPSINYLDISENKFTGTLFSNLSCNAELLFVNLSSNLLKGELPTCLKPKTRIVSYARNCLSDEDQHQRPPNFCQTEALAVTIIPHERKHKESSANPVLISTMGGIFGGILIVGVVFLVINRVHNKQAVEIPAKSTLEDAISKEHDKQEETTPKRSMMEHVISGMPSKQAVRTFRKSIMENVIRRVKFKHVAKTTKRSIIERASSVNTAKLLTDARYISLTMKMGDSLPAYRTFALDELKEATNNFDASGFISEDSHGQIYKGALSDGTSIAIRSLKMRKRHSPQTYMHHIELISKLRHSHLVSALGHCFEFNQDDSNVSSIFLIFEFVPNRSLRDCVSGSSQDKLSWTHRIVAAIGVVKGIQFLHTGTVPGLYSNNLKITDILMDNSLNVKISSYNLPLLADSKRMVGTGTFGTKGNVQTRIKDGDKNDVYDIGVILLEIILGRPIMFHNEVGTLKDLVQVSITTDDIGRRSIVDPAVHKECSDQSLKTMMEICVRCLSSEPSDRPSVEDILWNLHFAAQVQHSWRRDSSDNRESPALCSREMQELRLA	843

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva07g01011	843	PANTHER	INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	11	435	-	-
	Bva07g01011	843	PANTHER	INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED	476	829	-	-
	Bva07g01011	843	ProSiteProfiles	Leucine-rich repeat profile.	205	227	IPR001611	GO:0005515
	Bva07g01011	843	ProSiteProfiles	Protein kinase domain profile.	539	820	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva07g01011	843	Gene3D	Phosphorylase Kinase; domain 1	501	621	-	-
	Bva07g01011	843	SUPERFAMILY	Protein kinase-like (PK-like)	521	811	IPR011009	-
	Bva07g01011	843	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	476	829	-	-
	Bva07g01011	843	Gene3D	Transferase(Phosphotransferase) domain 1	622	833	-	-
	Bva07g01011	843	Pfam	Protein kinase domain	550	806	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bva07g01011	843	SUPERFAMILY	L domain-like	31	338	-	-
	Bva07g01011	843	Pfam	Leucine rich repeat	156	216	IPR001611	GO:0005515
	Bva07g01011	843	Gene3D	Ribonuclease Inhibitor	247	357	IPR032675	-
	Bva07g01011	843	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	11	435	-	-
	Bva07g01011	843	Gene3D	Ribonuclease Inhibitor	30	246	IPR032675	-
	Bva07g01011	843	MobiDBLite	consensus disorder prediction	820	843	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva07g01011	Bva-Chr7	11848529	11853077	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva07g01011	46	831	Miscellaneous Gene Families	AT3G03770	45.980	0.0	598

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Bva07g01011		Pkinase	1.2e-17	CL0016