Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01010 ATGGCTACTACGGCACCCCTCCACCGTCCCCCTCCGATCCTCTCTTCTCATTCTCCCTCCGCTAAACATCACTATATTCTCTCGCCCTTCTCGGAAGCGCACACCTATTATCCCAAATTTAACGGCCACAGTTTTCCAACCGTTCTTTCCCGCCAATTTTCCTGCTTTCCTAGGCGCTGTgctttgagaaatttgaatcctTCATCAAGCTTGGTTACAATGGCTTCTGCCAACACAGAGCCCATGGTTCCTCCTTACAACGTGTTAATAACTGGGTCAACCAAAGGAATTGGATATGCATTGGCAAAAGAATTTCTAAAAGCTGGTGACAATGTCCTAATTTGCTCAAGATCAAATGAAAGGGTGGAATCTGCTGTCCAGAGCCTTAGAAAAGAATTCGGGGAGCAGCATGTGTGGGGAACTAAATGTGACGTAAGAGAAGGAGAGGACGTCAAGAATTTAGTTGCATTTGCtcaagaaaaactaaaatacattGATATATGGATTAATAATGCAGGATCAAATGCATATAGCTATAAGCCACTTGCAGAGGCTTCTGATGAAGATCTTATTGAGGTGGTGACAACAAATACACTTGGTTTGATGATATGTTGTCGAGAGGCAATAAAGATGATGATAAACCAGCCACGCGGAGgtcatattttcaatattgatGGAGCAGGTTCTGATGGAAGACCAACTCCCAGGTTTGCTGCATATGGAGCAACAAAGCGAAGTGTGGTGCATTTAACCAAATCATTACAGGCAGAACTGCAGATGCAAGATGTTAAAAATGTTCTGGTGCATAATCTTTCGCCAGGGATGGTCACAACTGATCTTCTCATGTCCGGTGCTACCACAAAGCAGGCTAAGTTCTTCATCAATATCTTGGCTGAACCAGCTGAAGTAGTTGCAGAATACCTAGTTCCAAACATTAGATCTATCCCTGGCAATGGATCAAGGAAGCCGACTTATATTCGATTCCTCACAGGGTTGAAAGCCTATTCCCAGATATTTTcaAGATTAGCATTTGGGGCAAGAAGGAACCGATATGTTATTGAAGATTG 1067 0.4152 MATTAPLHRPPPILSSHSPSAKHHYILSPFSEAHTYYPKFNGHSFPTVLSRQFSCFPRRCALRNLNPSSSLVTMASANTEPMVPPYNVLITGSTKGIGYALAKEFLKAGDNVLICSRSNERVESAVQSLRKEFGEQHVWGTKCDVREGEDVKNLVAFAQEKLKYIDIWINNAGSNAYSYKPLAEASDEDLIEVVTTNTLGLMICCREAIKMMINQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVLVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPAEVVAEYLVPNIRSIPGNGSRKPTYIRFLTGLKAYSQIFSRLAFGARRNRYVIED 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01010 355 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 56 355 - -
Bva07g01010 355 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 219 227 IPR002347 -
Bva07g01010 355 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 240 259 IPR002347 -
Bva07g01010 355 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 174 IPR002347 -
Bva07g01010 355 Gene3D - 86 310 - -
Bva07g01010 355 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 56 355 - -
Bva07g01010 355 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 227 255 IPR020904 GO:0016491
Bva07g01010 355 CDD SDR_c 88 317 - -
Bva07g01010 355 PRINTS Glucose/ribitol dehydrogenase family signature 213 229 IPR002347 -
Bva07g01010 355 PRINTS Glucose/ribitol dehydrogenase family signature 240 259 IPR002347 -
Bva07g01010 355 PRINTS Glucose/ribitol dehydrogenase family signature 87 104 IPR002347 -
Bva07g01010 355 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Bva07g01010 355 PRINTS Glucose/ribitol dehydrogenase family signature 264 281 IPR002347 -
Bva07g01010 355 Pfam short chain dehydrogenase 88 283 IPR002347 -
Bva07g01010 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 87 306 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01010 Bva-Chr7 11842288 11845993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01010 59 280 Acyl Lipid Metabolism Gene Families AT1G24360 29.362 9.65e-17 78.2