Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01009 ATGCACTATTCAAAGCTAACAGTGTCTCTTATAGGATATGTAAAGTCAGTTCAAGTTCACAGCTTTTCCTTCTCTACCCATAATGGTATCCCTCCAAGGGCACTCAGCAAATTTCAAGCTTGGCTTTCTTCCATATCCAATAGCAATTCCCTCAACGCCAAGCGTCAGTATTCTGGATACGCCATTGAACAGTTCTCCGACGACGAGTACGAGTGTGAATTCGAGAGCCAGCAGGCATCATCTACCGTGGCAAACGTTGACGAGTGGAAATGGAAACTCAGCTTACTGTCACGCAGTGAAAAGGACCAGGAGATTGTATCTAGAGATAGAAAAGATAGGAGAGATTATGAGCAGATATCTAACCTTGCCAAAAGGATGGGGCTTTACAGTGAACTGTATGGAAAAGTGGTGGTAGCAAGCAAGGTACCTCTTCCTAACTATAGGCCAGATTTGGATGATAAACGTCCGCAAAGAGAGGTGGTGATCCCACTAAGTTTGCAAAGGAGGGTTGAGAGTTTGTTGCAGGAACACCTTGATAGACTCCAGTTGAATTCTGGAAAGATGACTAGCAATTCAGATACTGTCAAGTCTACCAATGAGACAAATGATGTAGATACTGACGAGAATGCTGATTATTTTGTGGATGAAGCTGTTATGGAAAAGGTTCTCCAAAGGAGGAGTTTGAGGATGCGCAATATGCAAAGAGCTTGGCAGGAATCACCTGAAGGCAAGAAGATGCTGGAATTTCGGAAATCTCTGCCATCATTCAGGGAGAAGGAAGGCTTGCTTCAAGCTATAGCAAGAAATCAGGTGATTGTGATATCTGGAGAGACTGGCTGTGGTAAGACTACTCAACTTCCACAGTATGTATTGGAGTCACAGATAGAGTCTGGCCGTGGAGCATTTTGCAATATAATTTGCACTCAGCCTCGGAGGATATCTGCTATGGCTGTGGCAGAGAGAGTGTCAGTGGAGAGAGGAGAGCCTCTTGGTGAAACAGTTGGTTACAAAGTTCGACTAGAGGGAATGAGAGGAAAAAACACCCATCTTCTTTTTTGTACCAGCGGTATATTACTTCGGCGGCTGCTGAGTGATCGCAACCTGAATGGTATAACACATGTTTTTGTAGATGAAATTCATGAACGAGGCATGAATGAAGATTTCCTGCTAATTGTGTTGAAGGATCTGCTGCCACGTCGTCGAGATTTAAGATTGGTTTTAATGAGTGCCACTTTGAATGCTGAGCTTTTTTCGAATTATTTTGGTGGTGCACCAACATTAAATATCCCAGGTTTCACCTATCCTGTGAGAGCCCACTTTTTGGAAGATGTTTTGGAAATAACTGGATATAAGTTGACTCCGTTCAATCAAATTGATGATTATGGTCAAGATAAAATGTGGAAAACACAAAGGCAGTTAGTGCCtcggaaaaggaaaaatcagaTCACTTCTCTTGTTGAGGAAGCTCTCTCTAAATCAAGCTTTGAGAATTATAGCTCTAAGGCGCGTGATTCACTTGCATCATGGGCACCTGACTGTATAGGATTTAATCTCATTGAGGCCGTTCTATGCCACATATGTCGGAAGGAAAGACCAGGTGCTGTCCTTGTATTCATGACAGGATGGGAGGATATAAGTTGTTTAAGAGATCAGCTTAAAGCGCATCCTCTCTTAGGAGATCCAAATAGAGTTTTGCTTCTAACTTGCCATGGTTCAATGGCAACTTCTGAACAGAAACTTATATTTGAGAAACCACCTCCAAATGTAAGAAAAGTAATCCTTGCAACAAATATGGCGGAAGCAAGTATTACAATCAATGATGTAGTTTTTGTAATTGATTGtggaaaagcaaaagagacCACTTATGATGCCTTGAATAACACACCGTGTCTTCTACCATCTTGGATATCACAAGCATCTGCTCGGCAGAGAAGGGGTAGGGCTGGTCGTGTGCAGCCAGGGGAATGCTACCACCTCTACCCAAAATGTGTTTATGAGGCTTTTTCTGAATATCAGCTACCCGAGCTATTGAGAACgcctttgaattctctttgcttgcaaataaaaagtttGGAGGTTGAGAGTATAGGCAAGTTCTTATCAGCGGCTCTACAGGCACCGGAGCCACGGGCTGTCCAAAATGCTATTGATTTTCTCAAGATGATCGGAGCATtagatgaaaaggaaaatcttaCTAATCTTGGGAAGTTTCTGTCTATTCTCCCGGTTGATCCCAAGCTTGGGAAAATGCTAATAATGGGAGCTATATTTCGCTGCTTTGATCCTGTTCTTACAGTAGTTGCTGGGCTTAGTGTCAGGGATCCTTTCCTTTTGCCCCAAGACAAGAAGGATtTGGCAGGGACAGCAAAGTCTAGATTTTCTGCTAAAGATTACAGCGATCATATGGCTCTTGTTCGTGCATATGAAGGATGGAAAGATGCAGAAAGAGAAGGATCTGCTTATGAATACTGTTGGAGAAATTTCCTCTCTGCCCAGACTCTTCAGGCTATACGGTCTCTCCGGAAGCAGTTTAGTTTCATCTTGAAAGATGCTGGCTTGGTAGACGAAGATGCAAGTATTAACAACAAATTGAGTCACAATCAGTCGCTGGTTCGTGCTCTCATATGTTCCGGCCTCTTTCCGGGCATAGCATCTGTGGTGCATCGGGAAACATCCATGTCTTTTAAAACAATGGACGATGGCCAGGTTTTATTATATGCAAACTCGGTAAATTCACGGTACCAGACAATTCCTTATCCATGGCTGGTTTTTGGCGAAAAAGTAAAGGTGAATGCTGTTTTCATACGTGATTCTACCGGTGTGTCTGATTCAATACTCATCCTTTTTGGTGGTGCTCTGAAAGATGGGATTCAGGCTGGGCATGTCAAAATGTTGGAAGGGTATATTGACTTCTTCATGGATCCTAGTTTAGCAGACTGCTATTTGAAGCTTAAGGAAGAGCTTGATAAAGTTATCCAAAAGAAGCTTGCAGATCCTAGTATTGACATTCACAAGGAAGGAAAATACTTGATGCATGCTGTTCAGGAACTGGTTTCGGGTGATCAATGTGAAGGAAGATTTGTATTTGGCCGCGAAAGCCGGAAGCCTCGAGCATCAAGTGACGACAGTAATTTCACAAAAGATGGGACAAACCCGAAAAGCTTGTTGCAGACGCTACTGATGCGAGCAGGACATTCCCCGCCGAAGTACAAAACAAAACACCTCAAGACAAATGAATTTAGAGCTCTGGTGGAATTCAAAGGAATGCAATTTGTTGGAAAACCCAAGAGAAACAAGCAGCTTGCAGAAAGGGATGCTGCCATAGAGGCATTGGCCTGGTTGACTCACACCTCCGACAATTATCGGGGACACGATGACGCCTCTCAGCCAGATGTCACTGACAACATGCTAAAACTGCTCGGGAAACGAAGAAAATCCAAGGGTCGCAAGGGTTG 3455 0.4232 MHYSKLTVSLIGYVKSVQVHSFSFSTHNGIPPRALSKFQAWLSSISNSNSLNAKRQYSGYAIEQFSDDEYECEFESQQASSTVANVDEWKWKLSLLSRSEKDQEIVSRDRKDRRDYEQISNLAKRMGLYSELYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVESLLQEHLDRLQLNSGKMTSNSDTVKSTNETNDVDTDENADYFVDEAVMEKVLQRRSLRMRNMQRAWQESPEGKKMLEFRKSLPSFREKEGLLQAIARNQVIVISGETGCGKTTQLPQYVLESQIESGRGAFCNIICTQPRRISAMAVAERVSVERGEPLGETVGYKVRLEGMRGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSNYFGGAPTLNIPGFTYPVRAHFLEDVLEITGYKLTPFNQIDDYGQDKMWKTQRQLVPRKRKNQITSLVEEALSKSSFENYSSKARDSLASWAPDCIGFNLIEAVLCHICRKERPGAVLVFMTGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLIFEKPPPNVRKVILATNMAEASITINDVVFVIDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHLYPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLEVESIGKFLSAALQAPEPRAVQNAIDFLKMIGALDEKENLTNLGKFLSILPVDPKLGKMLIMGAIFRCFDPVLTVVAGLSVRDPFLLPQDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIRSLRKQFSFILKDAGLVDEDASINNKLSHNQSLVRALICSGLFPGIASVVHRETSMSFKTMDDGQVLLYANSVNSRYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALKDGIQAGHVKMLEGYIDFFMDPSLADCYLKLKEELDKVIQKKLADPSIDIHKEGKYLMHAVQELVSGDQCEGRFVFGRESRKPRASSDDSNFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNYRGHDDASQPDVTDNMLKLLGKRRKSKGRKG 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01009 1151 Pfam DEAD/DEAH box helicase 264 414 IPR011545 GO:0003676|GO:0005524
Bva07g01009 1151 Pfam Helicase conserved C-terminal domain 521 651 IPR001650 -
Bva07g01009 1151 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 518 692 IPR001650 -
Bva07g01009 1151 Gene3D - 515 671 IPR027417 -
Bva07g01009 1151 Gene3D - 694 795 - -
Bva07g01009 1151 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH5, MITOCHONDRIAL 46 1044 - -
Bva07g01009 1151 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 263 430 IPR014001 -
Bva07g01009 1151 Gene3D - 1032 1119 - -
Bva07g01009 1151 SUPERFAMILY dsRNA-binding domain-like 1042 1116 - -
Bva07g01009 1151 CDD DEXHc_RHA-like 269 429 - -
Bva07g01009 1151 Gene3D - 202 431 IPR027417 -
Bva07g01009 1151 Pfam Double-stranded RNA binding motif 1052 1114 IPR014720 -
Bva07g01009 1151 MobiDBLite consensus disorder prediction 1030 1052 - -
Bva07g01009 1151 CDD SF2_C_RHA 507 660 - -
Bva07g01009 1151 SMART ha2_5 714 805 IPR007502 GO:0004386
Bva07g01009 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 261 829 IPR027417 -
Bva07g01009 1151 SMART helicmild6 546 652 IPR001650 -
Bva07g01009 1151 SMART ultradead3 251 444 IPR014001 -
Bva07g01009 1151 SMART DRBM_3 1052 1115 IPR014720 -
Bva07g01009 1151 Pfam Helicase associated domain (HA2) 715 788 IPR007502 GO:0004386
Bva07g01009 1151 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 871 952 IPR011709 -
Bva07g01009 1151 PANTHER ATP-DEPENDENT RNA HELICASE 46 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01009 Bva-Chr7 11831062 11841641 Dispersed/Transposed