Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01007 ATGAACGCCCCTATAATTGATCCGTTGCAGGGAGATTTTCCGGAAGTGATAGAGGAATATTTGGAGCATGGTGTTATGAAATGTATTGCCTTCAATCGTCACGGCACTCTTCTTGCTGCTGGATGCAATGATGGAAGTTGTGTTATTTGGGATTTTGAAACCAGGGGCATTGCTAAGGAGCTTCGGGATACTGAATGTTCTGCTCCCATAACTAGTGTCTGTTGGTCAAAGTATGGTCATCGCATTCTTGTATCTGCTGCTGATAAGTCATTAACATTGTGGGATGTTAAGAGTGGTAAGAGGATATCACGGATAGTTTTGCAACAAACTCCTCTACAAGCTCGTCTACATCCTGGTTCCTCTACCCCATCTCTCTGCTTGGCATGCCCTCTCTCATGTGCTCCAATTATTGTTGACTTGAATACTGGAGACACAACATCACTTAAAGTTTCAGTTTCGGAGACATGCACTGGACCCACCCCTCCACCACGCAACAAATGCTCGGATGGTACTCAGACATTCACACCAACCGCTGCATGCTTTAATAAGTATGGGAATCTGGTTTATGTGGGAAACTCAAAGGGGGAAATTCTTATAACTGatcacaaagaaaatgaaatccgTGCCATGGTTCCTATCTCTGGAGGTTCTGTAGTCAAGAACATAGTGTTCAGCAGAAACGGGCAGTATCTGCTGACAAATTCAAATGATCGAATAATCAGGATCTATGAAAACCTTCTGCCTTTGAAAGATGAAGTTAGAGCCCTTGATGACCTTAGTGCGAACCTCAGTGATCTAGATGATGTTGAGAAGTTGAAGACTGTTGGATCAAAATGTCTAATTTTATTCCGTGAGTTTCAAGATGCCATCACAAAGGTGCACTGGAAAGCACCCTGTTTTAGTGGTGATGGTGAGTGGGTAGTCGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAGCTGGGCATCTTGTGAAAATTCTTGAAGGACCCAAAGAAGCTGTTATTGATCTAGCATGGCATCCTGTTCATCCAATTGTTGTATCTGTTTCTCTGATTGGTGTAGCTTATATTTGGGCTAAAGATTACACTGAGAACTGGAGTGCATTTGCCCCGGATTTCAAAGAACTTGAGGAAAATGAGGAATATGTAGAACGAGAAGATGAATTTGATCTGATACCTGAGACTGAGAAGGTGAAAGGATCTGATGTTAATGAAGATGAGGAAGTTGACATTGTGACAGCGGAGAAAGATGCTGATTTAAGTGATTCTGATATGTCACAAGAAGAATTACGTTTCTTGCCAGTAACTCCTACTCGTGATGTTCCCGAGCAGCAGGACAAGGGCCTAGAAAGTTCTTCCAAACTGGTGGAAAGTAATAATTCTGCATCCCCACTTTCAGAGGAGGCTGGACCGAATGGACATGTGAACAATGCGGCAAGTCCACTTGAAGATGATGCCACCAAAGGAGGGCGCTTGAAAAGGAAGCGGAAACCTTCAGAGAAGGGTTTGGAGTTGCAGGCagacaaaaacaagaaacccTCAAAGTCTAGTAAATCATCCAAATCAAAAAGTAAATCTTTGGTTGATCATGATAATGGTAACGGATTATATGGCGATGACATGTCTGATGACTA 1649 0.419 MNAPIIDPLQGDFPEVIEEYLEHGVMKCIAFNRHGTLLAAGCNDGSCVIWDFETRGIAKELRDTECSAPITSVCWSKYGHRILVSAADKSLTLWDVKSGKRISRIVLQQTPLQARLHPGSSTPSLCLACPLSCAPIIVDLNTGDTTSLKVSVSETCTGPTPPPRNKCSDGTQTFTPTAACFNKYGNLVYVGNSKGEILITDHKENEIRAMVPISGGSVVKNIVFSRNGQYLLTNSNDRIIRIYENLLPLKDEVRALDDLSANLSDLDDVEKLKTVGSKCLILFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEAVIDLAWHPVHPIVVSVSLIGVAYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKGSDVNEDEEVDIVTAEKDADLSDSDMSQEELRFLPVTPTRDVPEQQDKGLESSSKLVESNNSASPLSEEAGPNGHVNNAASPLEDDATKGGRLKRKRKPSEKGLELQADKNKKPSKSSKSSKSKSKSLVDHDNGNGLYGDDMSDD 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01007 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 70 104 IPR001680 GO:0005515
Bva07g01007 549 Pfam WD domain, G-beta repeat 289 323 IPR001680 GO:0005515
Bva07g01007 549 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Bva07g01007 549 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Bva07g01007 549 ProSitePatterns Trp-Asp (WD) repeats signature. 38 52 IPR019775 -
Bva07g01007 549 Gene3D - 22 132 IPR015943 GO:0005515
Bva07g01007 549 MobiDBLite consensus disorder prediction 420 549 - -
Bva07g01007 549 MobiDBLite consensus disorder prediction 491 520 - -
Bva07g01007 549 MobiDBLite consensus disorder prediction 453 472 - -
Bva07g01007 549 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Bva07g01007 549 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 1 530 IPR037850 GO:0048188
Bva07g01007 549 Gene3D - 137 425 IPR015943 GO:0005515
Bva07g01007 549 SMART WD40_4 160 201 IPR001680 GO:0005515
Bva07g01007 549 SMART WD40_4 54 95 IPR001680 GO:0005515
Bva07g01007 549 SMART WD40_4 203 244 IPR001680 GO:0005515
Bva07g01007 549 SMART WD40_4 325 364 IPR001680 GO:0005515
Bva07g01007 549 SMART WD40_4 13 51 IPR001680 GO:0005515
Bva07g01007 549 SMART WD40_4 276 323 IPR001680 GO:0005515
Bva07g01007 549 SUPERFAMILY WD40 repeat-like 24 363 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01007 Bva-Chr7 11822068 11826223 Transposed