Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01005 ATGGCTGGCATGCAAAGAACACCATTGGGTGCTGTATATGAGGACTTTCAGCCAAAGTTAGAAAAAACAGAAACTCCAGAAGCTCACTTTCTGCAAGTTCACCTTCCTGGTTTCACAAGAGATCAAGTAAAGGTTAGATATGTGACTTCTACAAAAGCTATGAGTGTTTCCGGAGAACGACCAGTAGGAGGCAACAAATGGATCCGTTTCAGAGAATCATATCCTGTTCCTGAAAATTGTGAGCTGAATAAACTTCGTGGCAACTTTGATCAAGGAATGCTCACCATTACAATGCCAAAGAAGTTCATTACCCCAGTTGCTCCAAAAGAAGAATTGGAAACAAGTGAAGATACCATTACCAGCATGGAAGAACCAGATACTTCACTTGGTGCTGTTTATGAGGAATTCCAGCCCAAGACAGAAATGACTGAAAATCCGGAAGCTTACCATTTGCAAGTTCACCTTCCAGgatTCACAAAGGAGCAAgtaaagattaaatataacagCTCTTCAAGGGTGATAAGCATTTCTGGAGAAAGACCGATTGAGGGAGGCAAAAAGTGGAGTCGTGTCGAGCAACAGTATCCAGTTCCAGAAAATTTCAACGAGCAAAGACTTGGGGCAAAGTTTGCTACGGGAATTCTCACCATTACAATGCCGAAGAAGTATATTACCCCTGCTGTTCCAAAAGAAGAACTCAAAACAAGTGAGGATACCACTACCAGCGTGGAAGAACCAAAATATCCTTCTCTAGATGATGTTTATGAGGAATTCCAACCCCAGACAGAAATAATTGAAAGGCCAGAAACTTACCTTCTGAAAGTTTTCCTTCCTGGGTTTACAAAGGATCAAgtaaagattaaatatattggCTCTTCAAGAATGATAAGCATTTCTGGGGAAAGACCAATTGAAGGAGGCAAGAGGTGGAGCCGTGTTGAGCAACAATTTCATGCTCCAGAAAATTTCAATGAGCAAAGACTTGGGGCAAAGTTTGACGTGGGAATTCTCACTATTACAATGCCAAAGAAGTTTATTACCCCAGATGTTCCAAAAGAAGAACCGAAAACAAGTGAAGATACCACTCCCAGCGTGGAAGAACCAAAGGAGCCTTCACTTGGTGCTGTTTATGAGGAATTTCAGCCCAAGGGAGAAATGACTGAAAATCCAGAAGCTTATATTTTGCAAGTTCACCTTCCAGGGTTCACAATGGAGcatattaagattaaatatatcaaCACTTCAAGAGTAATAAGCATTTCTGGAGAAAGACCAATTGAAGAAGGCAAAAGGTGGAGCCGTGTCGAGCAACAATATCCAGTTCCAGAAAATTTCAAAGAGGAAGGACTTGTGGCAAAGTTTGATCAAGGAATTCTAACTATTAAATTGCCAAAAAAGTTTCCTTCCCTTGTTGCtccaaaagaagaagttaaaaCAAGCCAAGACACAGGTCCAAGCCCCTTGAAGGAAGCCATGGTTGAACCAAAGCCTCAAAAAGCTGAAGAGATGATTCCTCCAAAAGCTGTCACAACCAGCGAGGAAGAACTGAAGAAAGAGGGTACTGTTGATGCTCAAGAACCCATAAGGGAATCCAAACCTCAAAAGGGTCCAGAGGAAATTGTTCAGAAAGCTCCCATTGGTCCTGTTTATGAGGAATTCCAACCCAAGTCAGAGATGGTAGAAAACCCAGAAGCTTACCATATGCAAATTCAGCTTCCTGGTTTCACGAGGGATCAGGTGAAGATTAAATATGTCAGCTCTTTAAAAGTGATGAGCATTTCCGGGGAAAGACCAATCGAGGGAGAAAATAGATGGCTCCGGGTTAACCAAGCATATCCAGTTCCTGATAACTGTGATGCCGGAAGAGTTCAAGGCAAGTTTGATATGGGAATTCTCACTATTACAATGCCAAAGAAGTTCATTCCCCCGGTTCCTCGAAAAGAGGAAGTGAAAGCAATCCAAGAAAAAGTTCCAAGCCCTCTAGAGAAATACATGGCTGATGTAGCAAAGCCAGCTGAGAAAGCACCAGCTATGGTGCTTCCCCCAAAAGCCAGTGTTGAAGGGAAGAGCATAGAAGATATTGCAGCCATAATAGGGAAGGGAATTCAAGAAATGTCTGCTTCTGCTTCCAGTGCTGTCACAAGTATAGGAGATGGGGTACtgaatgatgaagaaaagcaCTTAATGGCTATGGTGATTGCGACACTGGGGGCTTATGTTTCTTATAGGATAAGCACTTCTGGGAAACACTATAACTA 2258 0.4092 MAGMQRTPLGAVYEDFQPKLEKTETPEAHFLQVHLPGFTRDQVKVRYVTSTKAMSVSGERPVGGNKWIRFRESYPVPENCELNKLRGNFDQGMLTITMPKKFITPVAPKEELETSEDTITSMEEPDTSLGAVYEEFQPKTEMTENPEAYHLQVHLPGFTKEQVKIKYNSSSRVISISGERPIEGGKKWSRVEQQYPVPENFNEQRLGAKFATGILTITMPKKYITPAVPKEELKTSEDTTTSVEEPKYPSLDDVYEEFQPQTEIIERPETYLLKVFLPGFTKDQVKIKYIGSSRMISISGERPIEGGKRWSRVEQQFHAPENFNEQRLGAKFDVGILTITMPKKFITPDVPKEEPKTSEDTTPSVEEPKEPSLGAVYEEFQPKGEMTENPEAYILQVHLPGFTMEHIKIKYINTSRVISISGERPIEEGKRWSRVEQQYPVPENFKEEGLVAKFDQGILTIKLPKKFPSLVAPKEEVKTSQDTGPSPLKEAMVEPKPQKAEEMIPPKAVTTSEEELKKEGTVDAQEPIRESKPQKGPEEIVQKAPIGPVYEEFQPKSEMVENPEAYHMQIQLPGFTRDQVKIKYVSSLKVMSISGERPIEGENRWLRVNQAYPVPDNCDAGRVQGKFDMGILTITMPKKFIPPVPRKEEVKAIQEKVPSPLEKYMADVAKPAEKAPAMVLPPKASVEGKSIEDIAAIIGKGIQEMSASASSAVTSIGDGVLNDEEKHLMAMVIATLGAYVSYRISTSGKHYN 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01005 752 Gene3D - 359 467 IPR008978 -
Bva07g01005 752 Gene3D - 538 640 IPR008978 -
Bva07g01005 752 SUPERFAMILY HSP20-like chaperones 252 344 IPR008978 -
Bva07g01005 752 SUPERFAMILY HSP20-like chaperones 549 639 IPR008978 -
Bva07g01005 752 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 548 653 IPR002068 -
Bva07g01005 752 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 544 661 - -
Bva07g01005 752 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 126 238 - -
Bva07g01005 752 PANTHER HEAT SHOCK PROTEIN 26 544 661 IPR045045 -
Bva07g01005 752 PANTHER HEAT SHOCK PROTEIN 26 126 238 IPR045045 -
Bva07g01005 752 CDD ACD_sHsps-like 558 638 - -
Bva07g01005 752 Pfam Hsp20/alpha crystallin family 23 101 IPR002068 -
Bva07g01005 752 Pfam Hsp20/alpha crystallin family 142 223 IPR002068 -
Bva07g01005 752 Pfam Hsp20/alpha crystallin family 559 642 IPR002068 -
Bva07g01005 752 Pfam Hsp20/alpha crystallin family 264 345 IPR002068 -
Bva07g01005 752 Pfam Hsp20/alpha crystallin family 386 469 IPR002068 -
Bva07g01005 752 PANTHER HEAT SHOCK PROTEIN 26 692 749 IPR045045 -
Bva07g01005 752 PANTHER HEAT SHOCK PROTEIN 26 362 543 IPR045045 -
Bva07g01005 752 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 11 115 IPR002068 -
Bva07g01005 752 MobiDBLite consensus disorder prediction 511 537 - -
Bva07g01005 752 MobiDBLite consensus disorder prediction 347 370 - -
Bva07g01005 752 PANTHER HEAT SHOCK PROTEIN 26 247 364 IPR045045 -
Bva07g01005 752 MobiDBLite consensus disorder prediction 474 539 - -
Bva07g01005 752 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 253 359 IPR002068 -
Bva07g01005 752 SUPERFAMILY HSP20-like chaperones 11 100 IPR008978 -
Bva07g01005 752 CDD ACD_sHsps-like 141 221 - -
Bva07g01005 752 Gene3D - 4 102 IPR008978 -
Bva07g01005 752 Gene3D - 118 224 IPR008978 -
Bva07g01005 752 Gene3D - 240 345 IPR008978 -
Bva07g01005 752 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 692 749 - -
Bva07g01005 752 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 11 117 - -
Bva07g01005 752 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 362 543 - -
Bva07g01005 752 MobiDBLite consensus disorder prediction 347 366 - -
Bva07g01005 752 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 131 236 IPR002068 -
Bva07g01005 752 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 375 480 IPR002068 -
Bva07g01005 752 SUPERFAMILY HSP20-like chaperones 128 222 IPR008978 -
Bva07g01005 752 SUPERFAMILY HSP20-like chaperones 376 466 IPR008978 -
Bva07g01005 752 PANTHER HEAT SHOCK PROTEIN 26 11 117 IPR045045 -
Bva07g01005 752 CDD ACD_sHsps-like 385 465 - -
Bva07g01005 752 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 247 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01005 Bva-Chr7 11815060 11818468 Dispersed/Wgd