Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02825 ATGCCAAATCAGAAGTCCATTTTACAGAGCACTTTCCTCTTGTTACTTTTGCAGGTTTTAATCAATGTAGCTCTTGTGAGCTGTAAATCTACAATTGAGCCTTGCTCAAACTCAGACTCGTGTAATGCTCTCTTGGGCTACACTCTGTACACTGACCTGAAGGTCTCTGAGGTCGCTTCTCTCTTCCAAATAGACCCTATTGCTCTTCTCACCGCCAATGCAATTGACATTTCGTACCCTGACGTAGAACACCATATTCTCCCTTCCCATCTCTTCCTCAAAATCCCTATAACCTGTTCATGTGTTGATGGAATCCGCAAATCGGTGTCGACCCACTACAAAACTCGCCCCTCTGATACTCTCTCTTCGATTGCAGATTCAATATATGGGGGTTTGGTGTCTGCTGACCAGATTAGAGAGGCGAACTCGATAGCTGACCCTTCAGTGCTTGATCTGGGTCAAAATCTTGTGGTGCCGCTTCCATGCACCTGCTTCAATGGTACTGACAACTCTTTGCCTGCAATATACTTGTCGTATGTGGTGCAGCCAATTGATTCTCTGGCTGCTATTGCCGCCAGGTATTCCACTACTCTTACTGATTTGATGAATGTTAATGCCATGGGGAGCTCGGCTATCAGCGATGGTGATATTCTCGCTATTCCAATTCCGGCTTGTGCATCAAACTTCCCAAAGTATGCCTCTGATTATGGCTTGCTTGTCCCCAACGGAAGCTATGCTATTACAGCCGGTCACTGTGTGCAATGCAGCTGTGGGTCAGGGAATTTAAATTTGTACTGTATGCCTGCTTCCCTGGCAGTTTCTTGTTCTAGCATGCAATGTAAAAACAGCAACCTTATGCTTGGAAACGTTACAGCGCAACAGAGTAGTGCCGGTTGCAATGTTACTTCTTGCACTTATAATGGTATTGCTAATGGCACCATAATGACAACATTGTCTGCATCTCTTCAACCTCGATGCCCAGGGCCGCAGCAATTCCCTCCTCTTGTAGCCCCACCTACTTCTGTTCCTAAGGAATCACTATTTGCACCCGCACCATCACCTCAGTCAGATGTAGGTGGTACCATAACGCCAAGATCGCTTGTGCCAGCAGCAGGGTCATTTCCTGGATTCTCCCCAGCAAATGGCCCTATTAGTAGCGGGTTAGCTTCTGGTGCTTCTGATGCTTGCTCCTTGGTGAATCCGTTGCCCATTTTGATGGTTGCACTTGTGTTATTGTTTGTCAAGTTCTTGATCCCTGTGGCATTGTA 1268 0.4653 MPNQKSILQSTFLLLLLQVLINVALVSCKSTIEPCSNSDSCNALLGYTLYTDLKVSEVASLFQIDPIALLTANAIDISYPDVEHHILPSHLFLKIPITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIYGGLVSADQIREANSIADPSVLDLGQNLVVPLPCTCFNGTDNSLPAIYLSYVVQPIDSLAAIAARYSTTLTDLMNVNAMGSSAISDGDILAIPIPACASNFPKYASDYGLLVPNGSYAITAGHCVQCSCGSGNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTAQQSSAGCNVTSCTYNGIANGTIMTTLSASLQPRCPGPQQFPPLVAPPTSVPKESLFAPAPSPQSDVGGTITPRSLVPAAGSFPGFSPANGPISSGLASGASDACSLVNPLPILMVALVLLFVKFLIPVAL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02825 422 CDD LysM 178 220 IPR018392 -
Bva06g02825 422 Pfam LysM domain 113 159 IPR018392 -
Bva06g02825 422 Pfam LysM domain 179 221 IPR018392 -
Bva06g02825 422 ProSiteProfiles LysM domain profile. 177 220 IPR018392 -
Bva06g02825 422 Gene3D LysM domain 168 229 IPR036779 -
Bva06g02825 422 ProSiteProfiles LysM domain profile. 111 158 IPR018392 -
Bva06g02825 422 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 16 398 - -
Bva06g02825 422 SUPERFAMILY LysM domain 177 222 IPR036779 -
Bva06g02825 422 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Bva06g02825 422 CDD LysM 111 158 IPR018392 -
Bva06g02825 422 SMART LysM_2 178 221 IPR018392 -
Bva06g02825 422 SMART LysM_2 112 159 IPR018392 -
Bva06g02825 422 Gene3D LysM domain 107 167 IPR036779 -
Bva06g02825 422 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 16 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02825 Bva-Chr6 17706928 17709728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02825 7 421 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 67.458 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g02825 - - gmx:100808966 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02825 06 17706928 17709728 Bva06g02825 06 17706928 17709728 ECH