Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02151 ATGGAGAGCTACCTGAATGAGAATTTCGGAGACGTGAAACCAAAGAACTCCTCGGAGGAAGCGCTTCAGAGATGGAGAAAGCTCTGTTGGCTTGTGAAGAATCCTAAAAGGAGGTTTCGCTTCACTGCTAATCTTTCCAAGCGATCTGAAGCTGAGGCTATCAGACGCTCCAATCAGGAGAAGCTCAGAGTTGCAGTGTTGGTCTCCCAAGCTGCATTTCAGTTTATACAGGATCAAAATTCGTCAAGTCTATACATTGCACCGGAGGAAGTTAAAGCTGCAGGCTTTGAAATTTGTGCCGATGAGTTGGCATCAATTGTTGAAGTCCGTAATGTGAAGAAGTTGAATATTCATGGTGGGGTTGAGGCTTGCGTATGTGGGAAGGTTAAGGAAATAGGGAGCTCTAAGGTCTCTTCTGATTTCTTATCTGGCATTCCGGTTTCTGCTCTTAGAGTTCTACTCCAATCAATATTTAACAACACTAGAGGAGAAGTTGTCCGAAACAAGGATGGTAAGATTGAAATTCTGGGAACACCAACTGAAACTGCTATCTTGGAATTTGGTCTATCACTTTATGGTAATTTTCAGCAAGAACGACCAGCGTCGAAAATTGTGCAAGTTGAACCCTTCAATTCTTTAAAGAAGCGCATGGGGGTGGTTCTACAGCTTCCAGATGGTTGTTTCAGGGCACACTGCAAAGGCGCCTCTGAAATAATTCTAGCTGAATGTGACAAAGTTATAGACTCGAATGGTGAGGTTGTTCCCCTTCACGAACAATCCATCAGTGATTTGAGAaatacaattgaaaattttgcgAGTGAAGGTCTACGTACACTTTGCCTTGCTTACAAGGAGATTGGAAGCGAATACTCTGTTGGAAGTCCTATTCCCATCACGGGTTACACATGTATAGGAATTGTAGGTATTAAAGATCCAGTTCGTCCTGGTGTACGGGAGTCTATTGCCATTTGTAGGTCCGCAGGTATTACCGTTCGAATGGTTACCGGAGACAACATAAATACGGCAAAGGCAATTGCTAGGGAATGTGGAATTCTGACCGATGGTATAGCAATTGAAGGCCATGAGTTCCGTGAGAAGAGCGAGGCGGAATTGCTCGATATAATTCCAAAAATTCAGGTGATGGCTCGATCTACACCAATGGATAAGCTTGAACTAGTGAAACTCCTGAGGAAAACATTTGAAGACGTTGTCGCAGTCACCGGTGATGGTACGAATGACGCCCCAGCACTTCATGAAGCAGATATTGGACTTGCAATGGGCATTGCTGGAACCGAGGTGGCAAAAGAAAGTGCTGATGTGATAATATTAGATGATAATTTTTGCACTATTTCAACTGTGGCCAAATGGGGCCGTTCAgtatacataaatatacaaaaattcgTACAGTTCCAGCTTACAGTGAATATTGTTGCTCTGATTGTTAACTTCTCTTCTGCCTGTTTGACAGGAAATGCTCCCCTGACAGCAGTTCAGCTTCTATGGGTCAACCTGATCATGGACACTTTAGGAGCACTTGCACTTGCACTAGCCACTGAACCTCCAACTGATGACTTAATGACAAGACCACCTGTTGGTAGGAAAGGTGACTTTATCAGTAATGTGATGTGGAGGAACATCTTGGGGCAAGCTCTCTATCAATTTGTCATTATCTGGTTCCTCCTGGCTAGAGGAAAAGTAGCTTTCCATCTTGATGGCCCAGATTCTGATTCGGTACTGAACACGTTAATTTTCAACTCATTTGTATTCTGTCAGGTTTTCAATGAGATCAGTTGCAGAGAGATGGAACGTATAAATGTCTTCAATGGCATACTTAAGAACTACGTGTTTGTGGCCGTCTTCACTTGCACCATCCTCTTCCAAATCATGATTATTGAATGCTTGGGCACGTATGCCAACACATATCCCCTTAGTTTGGAGCAGTGGTTTGGTAGTGTTTTCCTTGGATTCCTAGGAATGCCAGTGGCAGCTGCTTTGAAGTTGGTCCCAGCGAATTACACGTACACGGGACAGAATTTCAGTACATCATCTGCTTTCATCGACCACAGATCTGGTGAATCTCGCGGGGCCTTATCCGAAAGCCCGCGGCTACCGGACCCTTCTGCTTCTGAGAATTCCGATGATCTTATTCGTCACTTGGTCTCTGATCTCGGGTCCCATTCTATTGACAAGCGAAAGGAAGCAGCCATGATTATCAGATTGCTCGCCAAGGACAAACCAGAATATCGCTTAAAAATCGCGAAAGCCGGGGCAGTTAAGCCATTAATTTCGCTTATGTCTTCACCCGATCTTGCGTTGCAAGAGACCAGCGTTACATCGATTTTGAACCTTTCATTGTGCGACGAGAATAAGGAGCTTATAGCTTCATGTGGAGGTATTAAGCCTTTGGTCGGAGCCCTGGAAACAGGGACGTCAACGGCTAAAGAGAACGCAGCATGTGCTCTGATTCATCTCTCTCAAAtagagaagaacaagatcgCGATTGGAAGGTCAGGAGCCATGCCCCTCTTAGTGGACCTTTTAAAGAAGGGGAGTTTGCGAGGTAAGAAAGACGCATCGGAGGCGCTTTATTGTCTTTGTTCAGTGAAGGAGAACAAGATGAGGGCAGTTCAAGCGGGAATCACAAAGCTGTTAGTGGAATTAATGGATGATTTCGGGTCAAACATGGTGGATCAGTCAGCGTTCGTTTTAAGCGTGTTGGCATCGGTACCGGAAGGGAGGAGATCGTTGGTGGACGAAGGAGGTATTCCAGTGCTGGTGAAAATTGTTGACGTGGGCTCGCAGCTACAGAAAGAAATCGCTGTGATTATCTTGTCACATATTTGCAAGGACAGCATGTCCCATTTGAACACGGTGGCTCTGGAAGGAGCGATTCCCCCTTTGATTTTTCTGTCGCTGTTTGGCACCAATCTCGCCAAGCAAAATGCCAAGACCCTCTTAGAGAATCTGCGGAAAGCAAGAACCGGCAACGCGGCTGCCCGCATGTCAGAAGGGTCAGTATA 3020 0.4454 MESYLNENFGDVKPKNSSEEALQRWRKLCWLVKNPKRRFRFTANLSKRSEAEAIRRSNQEKLRVAVLVSQAAFQFIQDQNSSSLYIAPEEVKAAGFEICADELASIVEVRNVKKLNIHGGVEACVCGKVKEIGSSKVSSDFLSGIPVSALRVLLQSIFNNTRGEVVRNKDGKIEILGTPTETAILEFGLSLYGNFQQERPASKIVQVEPFNSLKKRMGVVLQLPDGCFRAHCKGASEIILAECDKVIDSNGEVVPLHEQSISDLRNTIENFASEGLRTLCLAYKEIGSEYSVGSPIPITGYTCIGIVGIKDPVRPGVRESIAICRSAGITVRMVTGDNINTAKAIARECGILTDGIAIEGHEFREKSEAELLDIIPKIQVMARSTPMDKLELVKLLRKTFEDVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFCTISTVAKWGRSVYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNLIMDTLGALALALATEPPTDDLMTRPPVGRKGDFISNVMWRNILGQALYQFVIIWFLLARGKVAFHLDGPDSDSVLNTLIFNSFVFCQVFNEISCREMERINVFNGILKNYVFVAVFTCTILFQIMIIECLGTYANTYPLSLEQWFGSVFLGFLGMPVAAALKLVPANYTYTGQNFSTSSAFIDHRSGESRGALSESPRLPDPSASENSDDLIRHLVSDLGSHSIDKRKEAAMIIRLLAKDKPEYRLKIAKAGAVKPLISLMSSPDLALQETSVTSILNLSLCDENKELIASCGGIKPLVGALETGTSTAKENAACALIHLSQIEKNKIAIGRSGAMPLLVDLLKKGSLRGKKDASEALYCLCSVKENKMRAVQAGITKLLVELMDDFGSNMVDQSAFVLSVLASVPEGRRSLVDEGGIPVLVKIVDVGSQLQKEIAVIILSHICKDSMSHLNTVALEGAIPPLIFLSLFGTNLAKQNAKTLLENLRKARTGNAAARMSEGSV 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02151 1006 Pfam Cation transporting ATPase, C-terminus 492 668 IPR006068 -
Bva06g02151 1006 Gene3D - 424 676 - -
Bva06g02151 1006 SMART arm_5 909 949 IPR000225 GO:0005515
Bva06g02151 1006 SMART arm_5 868 908 IPR000225 GO:0005515
Bva06g02151 1006 SMART arm_5 745 785 IPR000225 GO:0005515
Bva06g02151 1006 SMART arm_5 786 826 IPR000225 GO:0005515
Bva06g02151 1006 SMART arm_5 827 867 IPR000225 GO:0005515
Bva06g02151 1006 Pfam Cation transport ATPase (P-type) 167 246 - -
Bva06g02151 1006 PANTHER CALCIUM-TRANSPORTING ATPASE 3 123 - -
Bva06g02151 1006 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Bva06g02151 1006 PANTHER CATION TRANSPORTING ATPASE 3 123 - -
Bva06g02151 1006 PANTHER CATION TRANSPORTING ATPASE 121 670 - -
Bva06g02151 1006 Gene3D - 809 894 IPR011989 -
Bva06g02151 1006 Gene3D - 313 423 IPR023214 -
Bva06g02151 1006 PANTHER CALCIUM-TRANSPORTING ATPASE 121 670 - -
Bva06g02151 1006 Gene3D - 17 77 - -
Bva06g02151 1006 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 353 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02151 1006 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 377 488 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02151 1006 Pfam haloacid dehalogenase-like hydrolase 302 421 - -
Bva06g02151 1006 PRINTS H+-transporting ATPase (proton pump) signature 439 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02151 1006 PRINTS H+-transporting ATPase (proton pump) signature 264 282 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02151 1006 PRINTS H+-transporting ATPase (proton pump) signature 407 423 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g02151 1006 SUPERFAMILY HAD-like 264 512 IPR036412 -
Bva06g02151 1006 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 144 317 IPR023299 GO:0000166
Bva06g02151 1006 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 756 798 IPR000225 GO:0005515
Bva06g02151 1006 SUPERFAMILY Calcium ATPase, transmembrane domain M 457 670 IPR023298 -
Bva06g02151 1006 MobiDBLite consensus disorder prediction 692 712 - -
Bva06g02151 1006 Gene3D - 122 312 IPR023299 GO:0000166
Bva06g02151 1006 PRINTS P-type cation-transporting ATPase superfamily signature 305 316 - -
Bva06g02151 1006 PRINTS P-type cation-transporting ATPase superfamily signature 407 426 - -
Bva06g02151 1006 PRINTS P-type cation-transporting ATPase superfamily signature 431 443 - -
Bva06g02151 1006 PRINTS P-type cation-transporting ATPase superfamily signature 327 337 - -
Bva06g02151 1006 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 152 670 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva06g02151 1006 Gene3D - 895 1001 IPR011989 -
Bva06g02151 1006 Gene3D - 707 808 IPR011989 -
Bva06g02151 1006 Pfam Armadillo/beta-catenin-like repeat 787 821 IPR000225 GO:0005515
Bva06g02151 1006 Pfam Armadillo/beta-catenin-like repeat 746 784 IPR000225 GO:0005515
Bva06g02151 1006 SUPERFAMILY ARM repeat 712 989 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02151 Bva-Chr6 14163029 14169836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02151 60 669 Primary Pumps ATPases AT1G27770 70.962 0.0 870
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00643 10 5592531 5594418 Bva06g02151 06 14163029 14169836 BWGD
Bva06g02151 06 14163029 14169836 Bva06g02151 06 14163029 14169836 ECH