Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02130 ATGGAGACTCGCGCAGCAAAGAGAAGGGCAGAGATCGCTGACTTGCCCCAGAACCAGTCGCCCAAGAAGAAACGGGTCGTCTTGGGGGAGCTTCCCAATTTGTCGAATACTATTCTTCCTGTAAGTTCGAATTCAATTCTCCAACCCAGGAAACGGGAATGCCGAAGGAAGACCAAGGTAAAAAGTTCTGCAATGACAAAGAAGATCATAATGTTGGAAGATCCCAAGTTAGATGATGCCAAGGTCAAGGCCAAGAAGGCGTTATACCCTGACACAAAGTCGGGCAAAGATGCCAAGCAGGATGACCCGCAAAACTGCGAATCGTATGTTTCGGACATATATGAATATCTGCACAAAATGGAGATGGAACCAAAGAGAAGGCCGATGCATGGCTACCTGGAGAAAATTCAGAAGGATGTTACTGCTAACATGAGAGGAGTATTGATTGATTGGTTGGTGGAGGTCTCTGAGGAGTACAAGCTTCTTTCGGACACACTTTTCCTCTCTGTTTCCTACATTGACAGATTCCTCTCTTCCAATCCTGTTAGTAGGCAGAGGCTTCAGTTACTGGGAGTTTCGTCCATGCTCATTGCTTCGAAATATGAAGAAATCAGCCCCCCTCATGTGGAAGAGTTTTGCTACATTACTGATAACACATACACCAAGGCAGAGGTAGTACAAATGGAGGCTGATATCCTTAAGTCCTTGAACTTTGAAATGGGCAACCCAACTGTGAAGACATTTCTAAGGAGGTTCGCCGGGTTCGTTTCTGGGGACCAAAAAAATCCAAATCTGCAGTTTGAGTTCCTGGGCTACTATCTGTCTGAGCTAAGCTTGTTGGActataattgtataaaattctTGCCTTCCCATGTTGCTGCCTCAGTTATATTCCTTGCCAGATTCATCATCTCGCCTAAAGTGCATCCCTGGACTTCGGCCCTCCAAGAGTGCTCGGGATATAAATCATCCGAGTTAAAAGAATGTGTGCTAATCTTGCACGACTTGTACTTGGCAAGAAGAGGAGGATCTTTGCAAGCTATAAGGGAAAAATACAAACAGCACAAGTTCAAGTGTGTGGCAACGCTGCCTTCCCCTCCGGAAATATCAGTTTCTTACTTTGAAGATGAGTGGTG 1136 0.4489 METRAAKRRAEIADLPQNQSPKKKRVVLGELPNLSNTILPVSSNSILQPRKRECRRKTKVKSSAMTKKIIMLEDPKLDDAKVKAKKALYPDTKSGKDAKQDDPQNCESYVSDIYEYLHKMEMEPKRRPMHGYLEKIQKDVTANMRGVLIDWLVEVSEEYKLLSDTLFLSVSYIDRFLSSNPVSRQRLQLLGVSSMLIASKYEEISPPHVEEFCYITDNTYTKAEVVQMEADILKSLNFEMGNPTVKTFLRRFAGFVSGDQKNPNLQFEFLGYYLSELSLLDYNCIKFLPSHVAASVIFLARFIISPKVHPWTSALQECSGYKSSELKECVLILHDLYLARRGGSLQAIREKYKQHKFKCVATLPSPPEISVSYFEDEW 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02130 378 CDD CYCLIN 243 334 IPR013763 -
Bva06g02130 378 PANTHER CYCLINS 17 376 IPR039361 -
Bva06g02130 378 SMART cyclin_7 247 335 IPR013763 -
Bva06g02130 378 SMART cyclin_7 150 234 IPR013763 -
Bva06g02130 378 Gene3D - 126 241 - -
Bva06g02130 378 SUPERFAMILY Cyclin-like 101 240 IPR036915 -
Bva06g02130 378 CDD CYCLIN 144 233 IPR013763 -
Bva06g02130 378 Pfam Cyclin, C-terminal domain 243 366 IPR004367 -
Bva06g02130 378 PIRSF Cyclin_A_B_D_E 1 376 IPR039361 -
Bva06g02130 378 Pfam Cyclin, N-terminal domain 112 240 IPR006671 -
Bva06g02130 378 Gene3D - 112 362 - -
Bva06g02130 378 SUPERFAMILY Cyclin-like 243 368 IPR036915 -
Bva06g02130 378 SMART Cyclin_C_2 243 366 IPR004367 -
Bva06g02130 378 MobiDBLite consensus disorder prediction 1 26 - -
Bva06g02130 378 PANTHER CYCLIN-A3-1-RELATED 17 376 - -
Bva06g02130 378 ProSitePatterns Cyclins signature. 145 176 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02130 Bva-Chr6 14066975 14069485 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02130 3 376 Core Cell Cycle Gene Families AT5G43080 56.800 2.96e-144 411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00668 10 5678343 5681115 Bva06g02130 06 14066975 14069485 BWGD