Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02120 ATGGCtcaccatcatcatcatcaacaagAGTCAGAGTCAGAGTCAGAGGCACAAGAGAACCCTAAATTCCTTCTGGATTCTCTCTACTGCTCAGAAGAGCATTGGGAGGAAGTGGGAGAAGACAATTGCCGCCAAGAATTAGACCAAGTGGATGAATGTTACCAAAATAGCAATAAGAGAAACTCTCCCGCCCTGGTGTTGCTAGAACAGGACCTCTATTGGGATGATGAAGAGCTAGCGCGTCTGCTCagcaaacaagagaaaaaccaACTCGATGCATACCTCGGAACCAATCCACACTTGGCTGCAGCTCGCAAAGAAGCCGTGGAGTGGATGCTCAAAGTGAATTCCCACTACTCTTTCTCTGCTCTCGCCGCCCTTCTTGCCGTCAACTACTTGGACAGGTTCCTTTCCAGTTTCCAATTTCAGAATGATAAGCCATGGATGACTCAACTCGCCGCCGTTGCCTGCCTTTCTCTAGCTGCCAAGGTGGAGGAGACCCAAGTGCCGCTTTTGCTAGACCTCCAAGTGGAGGACAGTAGATACATGTTCGAAGCCAAAACGATTAAAAGAATGGAGATTTTAGTTCTTTCCACTCTTGGATGGAAGATGAATCCTGTAACTCCACTCTCATTTCTTGATTATATCACAAGGAGACTTGGCTTAAAGGATTATCTCTGTTGGGAGTTCCTCAAGAGGTGCGAGGCTATTCTTCTCACTCTCATTGCagATTCCAGATTTGTTTGTTATCTTCCTTCTGCGGTGGCAACTGCAACAATGATTCATGTTGTCAACAGCGTAGAACCTCGTCTAGGAGTTGAGTACCAAAATCAGCTCCTGGGTATCCTTGGAATCAGTAAGGACAAAGTGGAGGAATGCTACAAGCTCATCTTGGAATTGGTATCAGGGTATGAGTGCCAGCACCACGTCATCGGCAAAGAATCCAACAAACGCAAGTTTGGATCTGCTCCTGGTAGCCCAAATGGCGTAATGGATGTGTCATTTTCATTCAGCGCTAGTGATAGCTCCAATGATTCTTGGTCAGTAGCTGGTTCTGTGTCGTCCTCGCCGGAGCCTCTGTCCAAGAAGACAAGGGGTCAAGACCAGCTTCTACTAAACCATCCCAATTCAGATTTCCTCACCATTCCTCGCTA 1154 0.4549 MAHHHHHQQESESESEAQENPKFLLDSLYCSEEHWEEVGEDNCRQELDQVDECYQNSNKRNSPALVLLEQDLYWDDEELARLLSKQEKNQLDAYLGTNPHLAAARKEAVEWMLKVNSHYSFSALAALLAVNYLDRFLSSFQFQNDKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEDSRYMFEAKTIKRMEILVLSTLGWKMNPVTPLSFLDYITRRLGLKDYLCWEFLKRCEAILLTLIADSRFVCYLPSAVATATMIHVVNSVEPRLGVEYQNQLLGILGISKDKVEECYKLILELVSGYECQHHVIGKESNKRKFGSAPGSPNGVMDVSFSFSASDSSNDSWSVAGSVSSSPEPLSKKTRGQDQLLLNHPNSDFLTIPR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02120 384 SUPERFAMILY Cyclin-like 73 205 IPR036915 -
Bva06g02120 384 Gene3D - 100 205 - -
Bva06g02120 384 PANTHER CYCLIN D3.1 PROTEIN 21 365 - -
Bva06g02120 384 CDD CYCLIN 105 197 IPR013763 -
Bva06g02120 384 Pfam Cyclin, C-terminal domain 207 322 IPR004367 -
Bva06g02120 384 MobiDBLite consensus disorder prediction 338 368 - -
Bva06g02120 384 ProSitePatterns Cyclins signature. 105 136 IPR006671 -
Bva06g02120 384 SMART cyclin_7 110 198 IPR013763 -
Bva06g02120 384 Gene3D - 206 295 - -
Bva06g02120 384 PANTHER CYCLINS 21 365 IPR039361 -
Bva06g02120 384 SMART Cyclin_C_2 207 341 IPR004367 -
Bva06g02120 384 Pfam Cyclin, N-terminal domain 85 205 IPR006671 -
Bva06g02120 384 SUPERFAMILY Cyclin-like 208 307 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02120 Bva-Chr6 14019081 14021032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02120 12 300 Core Cell Cycle Gene Families AT4G34160 54.266 1.24e-105 314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00685 10 5752452 5754587 Bva06g02120 06 14019081 14021032 BWGD
Bva06g02120 06 14019081 14021032 Bva08g00574 08 2957745 2959679 ECH
Bva06g02120 06 14019081 14021032 Bva11g01745 11 15642013 15643651 ECH
Bva06g02120 06 14019081 14021032 Bva13g00327 13 1534512 1536517 ECH
Bva06g02120 06 14019081 14021032 Bva14g00405 14 1995264 1997340 ECH
Bva06g02120 06 14019081 14021032 Bva06g02120 06 14019081 14021032 ECH