Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02075 ATGTCTACTAGAAGCGAAAGCCATACTACTATCCCCCTCTCTGTGCTTCTGAAACGTGAATTGgcaaatgagaaaattgagaaGCCAGAAATTTTACATGGTCAAGCCAGCCAGAGCAAGAAAGGCGAGGATTTCACACTACTAAAGACGGAATGCCAAAGGATGGTGGGAGACGGGGTATCTACCTATTCTGTTTTTGCGCTATTGGATGGACACAACGGATCTGCTGCTGCTATTTATGCCAAGGAGAATCTCCTAAGTAATGTTTTAAGTGCCATTCCTTCAGATCTAAACAAAGATGAATGGGTAGCAGCATTGCCAAGGGCTTTGGTGGCAGGCTTTGTAAAAACTGATAAAGATTTTCAGCAGAAAGCACAAACATCGGGAACAACTGTAACCTTTGTGATTATAGATGGATGGGTTGTTACTGTTGCATCTGTTGGTGATTCCCGTTGCATACTAGAACCTTCTGAAGGTGGAGTTTACTACTTGTCTGCAGATCATAGGCTAGAAACCAATGAAGAGGAgAGGGTGCGTATCACCTCAAGTGGGGGTGAGGTTGGTCGGTTGAATGCTGGTGGAGGTGCAGagATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCACGATCCATTGGTGATATGGATGTTGGTGAATTCATTGTACCTGTACCTTTTGTAAAGCAAGTGAAGCTATCTACAGCTGGAGGCAGGCTTGTTATCTGTAGTGATGGTGTTTGGGATAACCTAACAGCAGAAGCAGCCCTTGATTGTTGCCGAGGCATGTCAGCTGAGGCTGCAGCATCACAGATTGTCAAAGAAACTTTACAAGCAAAGGGACTTAGAGATGATACTACCTGCATCGTTATTGATATGTTACCCCAGGAAAAGCCACCTTCCTCTTTGCCACAACCAAAGAAACCGGTAAAAGGAATGTTTAAATCTATGTTCCGCAAAAAGTCTTCTGAATCATCGTCTTATATGGACAAAGAGTACATGGAGCCAGATGTGGTTGTGGAAATTTACGAGGAAGGATCTGCTATGCTTTCAGAGAGGCTAGATACAAAGTACCCCATCTGCAACATGTTCAAGTTGTTTATGTGTGCCGTGTGTCAATTAGAGATGAAACCTGGGGAAGGTATTTCGATACATGAAGGTGCCCCCAACCCAGGAAAATTGCGTCCATGGGATGGACCTTTTCTTTGCTTAAGTTGCCAAGAGAAGAAAGACGCCATGGAAGGGAAAAGAACTTCAGATAGACTTAGCAGTGGAAGTGACGAATG 1289 0.436 MSTRSESHTTIPLSVLLKRELANEKIEKPEILHGQASQSKKGEDFTLLKTECQRMVGDGVSTYSVFALLDGHNGSAAAIYAKENLLSNVLSAIPSDLNKDEWVAALPRALVAGFVKTDKDFQQKAQTSGTTVTFVIIDGWVVTVASVGDSRCILEPSEGGVYYLSADHRLETNEEERVRITSSGGEVGRLNAGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPFVKQVKLSTAGGRLVICSDGVWDNLTAEAALDCCRGMSAEAAASQIVKETLQAKGLRDDTTCIVIDMLPQEKPPSSLPQPKKPVKGMFKSMFRKKSSESSSYMDKEYMEPDVVVEIYEEGSAMLSERLDTKYPICNMFKLFMCAVCQLEMKPGEGISIHEGAPNPGKLRPWDGPFLCLSCQEKKDAMEGKRTSDRLSSGSDE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02075 429 SMART PP2C_SIG_2 47 294 IPR001932 -
Bva06g02075 429 Pfam Protein phosphatase 2C 54 278 IPR001932 -
Bva06g02075 429 SUPERFAMILY PP2C-like 39 293 IPR036457 -
Bva06g02075 429 SMART PP2C_4 22 292 IPR001932 -
Bva06g02075 429 Gene3D - 33 300 IPR036457 -
Bva06g02075 429 ProSiteProfiles PPM-type phosphatase domain profile. 25 294 IPR001932 -
Bva06g02075 429 CDD PP2Cc 40 293 IPR001932 -
Bva06g02075 429 PANTHER ALPHABET, ISOFORM E-RELATED 4 424 - -
Bva06g02075 429 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 4 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02075 Bva-Chr6 13797328 13802179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02075 1 428 PP2C-type Phosphatase Gene Family AT1G47380 78.089 0.0 711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00729 10 5994923 5999849 Bva06g02075 06 13797328 13802179 BWGD
Bva06g02075 06 13797328 13802179 Bva06g02075 06 13797328 13802179 ECH