Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02067 ATGATCTCGTCGGCACTAGCGAGTAGTCGTGGCTTCAATGCTCCAACTGTTGTGCAGCAGGCAAGGAATACATGCTTGCTTCCACGAACCTGTCGAAATCTTACGGTTCTAAGTATAGACGGGGGAGGAATAAAGGGTGTGATTCCAGGGGTTGTACTTGGTGCCCTTGAAAAAGGTCTCCAGGAATTGGATGGTAAGGAAGCTAGACTCGCCGAGTATTTCGATGTGATTGCGGGGACAAGCACAGGAGGCCTAGTCACTGCCATGCTCACTGCTCCTGATGAAAATAATCGACCTTTGTATGCAGCCCAAGAAATTAAGGACTTCTACCTTGAACACTGCCCGAGGATTTTCCCACAATACAAACCCAAATTGTTCCCCAACTTTGCAAAGCTCGTCAAGGCTATATCGGGACCAAAATACGACGGCAACTATTTACGCGATCTCCTTAAGAAAAAGCTCGGAGACAAGACGCTGCACCAAACACTTACCAACGTTATCATCCCAGCATTCGACATCTACACTCTTCAGCCCACCATCTTTTCCAGTTTTCAGCTGCCAAAAAGCCCAAGCTTAAACGCCAAGCTTTCGGATATATGCATCGCAACGTCAGCAGCACCCACCTATCTCCCTGCTCATAATTTTCAAACAACAGATGGCAATGGCAAAGTCAGAAATTTCCACCTCACGGATGGGGGTGTTGCTGCAAACAATCCGGCACTGATAGCCATTAGTGAAGTAACAAAGCAACTTATCAAAGGAGGCCCCTTAAAACCAACCGAATACAGCCGTTTTTTGGTTATATCGATAGGAACTGGCGCTCCCAAAGATCAACCGAGATACAATGCAATGGATGCAGCCAAGTGGGGGATCTTTAATTGGATAATTAATGGGCGTTCCAACCCTTTGATTGATGTTTTCACTCAAGCTAGTGCTGATATGGTTGACTTTCACCTCTCTGTGGTTTTTCAAGCTCTCCACTCCAAGGATTACTATCTCCGGATTCAGGACGATACGTTGAGTGGAGAATTAGATTCTGTAGACATGGCCACAGAGGAGATTTTGGATGCTCTTGTTAAACGTGGTGAACGATTATTAGCCAAAAGACTTTCTAGGGTTGACTTGGAAACTGGCAAGTTCGTACCCTGTGAATCTACCAATGAGACAAATGAAGAGGCTCTCAAGAGGTTTGCAAAAATGTTATCAGAAGAGAAGCGGCACCGGCAATCTGAAACACCCAGTTG 1244 0.459 MISSALASSRGFNAPTVVQQARNTCLLPRTCRNLTVLSIDGGGIKGVIPGVVLGALEKGLQELDGKEARLAEYFDVIAGTSTGGLVTAMLTAPDENNRPLYAAQEIKDFYLEHCPRIFPQYKPKLFPNFAKLVKAISGPKYDGNYLRDLLKKKLGDKTLHQTLTNVIIPAFDIYTLQPTIFSSFQLPKSPSLNAKLSDICIATSAAPTYLPAHNFQTTDGNGKVRNFHLTDGGVAANNPALIAISEVTKQLIKGGPLKPTEYSRFLVISIGTGAPKDQPRYNAMDAAKWGIFNWIINGRSNPLIDVFTQASADMVDFHLSVVFQALHSKDYYLRIQDDTLSGELDSVDMATEEILDALVKRGERLLAKRLSRVDLETGKFVPCESTNETNEEALKRFAKMLSEEKRHRQSETPS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02067 414 PANTHER XYLOSE ISOMERASE 20 412 - -
Bva06g02067 414 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 37 244 IPR002641 GO:0006629
Bva06g02067 414 Gene3D Cytosolic phospholipase A2 catalytic domain 27 413 - -
Bva06g02067 414 Pfam Patatin-like phospholipase 37 244 IPR002641 GO:0006629
Bva06g02067 414 CDD Pat17_isozyme_like 34 378 - -
Bva06g02067 414 PANTHER PATATIN 20 412 - -
Bva06g02067 414 SUPERFAMILY FabD/lysophospholipase-like 33 377 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02067 Bva-Chr6 13772756 13774839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02067 26 413 Miscellaneous Gene Families AT2G26560 58.438 1.58e-159 454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00740 10 6050525 6053016 Bva06g02067 06 13772756 13774839 BWGD
Bva06g02067 06 13772756 13774839 Bva06g02067 06 13772756 13774839 ECH