Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02055 ATGCCTCTCTCTTGtaaatcttcttcttctccattacCCTACACGCCTTCCGCTGTTTCCGATGTCCGACAAACGAACGGAGATGGCAATgccaataatttcttatacgCCAAGGGGCAATCGCTTCGGCAGCGCCGGCTTACCAGACAGAGGAAGCTCCGGCGCCTCAGCGATATTGGCTTGCACTTTACTGAGCCATCTTCTTTACCGGCTACGCCTAAGTCACCTCGTAACTCCCCGTCTGCGGTTCCGCAACCGTTGCCGCTCCCGGAATCATCGTTGATTCGAAGACCGGAGTCAACCACTCCAAATTCCGGCCTGGCCCAACTAGGATCTCCACCCTTAGAACATCCCGGCTTTGTGTTTGGGAGGAAGACTTCGGATCCTGCAGTGACAAATACTAAATATTCaagcaaggaagagagaagacTCTTTTGTGATATCGAGAGTATTTACAACTTGAGGTTGCCAGTTTCTGCCAAGAGTGCTCCAACAACTGTTTTCTCCAGTCCTGTTAGTAGTCCGCGTAGGTCAAGCAATATAGATTTATTTGTTCCTTTAACCATTACTCCTCAAGATCACACTCTTCCTCATAGTCCAGGGAGCCAGAGTTCTTACGTCAATCCTAGAATTAGAGAATCACCTCAGcaccataaattattttccagGGTGTGGCCTGAGAATAACCTTGTCGATGCACATCCATTGCCCCTTCCCCCGGTACCTGTACAATATCAATCAAGTGCCACTCATCACAGTGGAGAAAATTCACCCTCGCAGAAAGGCAAATGGCAGAAAGGAAAACTTATTGGACGTGGTACATTTGGAAGTGTTTATCACGCAACCAACCTAGAGACTGGAGCATCGTGTGCAATGAAGGAAGTGGACATTATTCCTGATGATCCCAAATCTTTCGAGTGTATAAAGCAACTAGAGCAGGAAATCAAAATTCTGCGCCAACTGAACCATCCAAATATTGTACGATATTATGGCAGTGAAATAgtTGGTGATcacttttacatatatatggaGTATATTCATCCTGGTTCGATCAATAAATTCGTGAGTAACCATTGTGGGGCTATGACAGATTCTGTAGTTCGTAATTTTACCCGCCATATTCTCTCTGGCTTGGCTTATCTGCACAGCACCAGCACTATACACAGGGACATTAAAGGTGCAAACTTGCTGGTTGATTCATCAGGCGTTGTCAAGCTTGCAGATTTTGGGATGGCAAAAGTTCTGACAGGGCAGTCATACGATCTTTCATTGAAGGGCAGTCCATATTGGATGGCTCCAGAGGTTATGATGGCAGCCATGAGGAAAGATACCAATCCTACCCTTGCCTTGGCTGTTGATATATGGAGCTTAGGATGCACCATAATCGAAATGCTGACAGGCAAACCTCCTTGGAGAGAGTATGAAGGGCCTACCGCCATGTTCAAGGTTCTGAATAATACCCCACCTATACCAGAAACATTATCATCGGAGGAAAAGATTTTCTCCAGCAATGTTTTATCAGAGATCCTGCAGAGCGGCCATCCGCAGCAAAGTTGCTCGACCATGCCTTCGTA 1574 0.4384 MPLSCKSSSSPLPYTPSAVSDVRQTNGDGNANNFLYAKGQSLRQRRLTRQRKLRRLSDIGLHFTEPSSLPATPKSPRNSPSAVPQPLPLPESSLIRRPESTTPNSGLAQLGSPPLEHPGFVFGRKTSDPAVTNTKYSSKEERRLFCDIESIYNLRLPVSAKSAPTTVFSSPVSSPRRSSNIDLFVPLTITPQDHTLPHSPGSQSSYVNPRIRESPQHHKLFSRVWPENNLVDAHPLPLPPVPVQYQSSATHHSGENSPSQKGKWQKGKLIGRGTFGSVYHATNLETGASCAMKEVDIIPDDPKSFECIKQLEQEIKILRQLNHPNIVRYYGSEIVGDHFYIYMEYIHPGSINKFVSNHCGAMTDSVVRNFTRHILSGLAYLHSTSTIHRDIKGANLLVDSSGVVKLADFGMAKVLTGQSYDLSLKGSPYWMAPEVMMAAMRKDTNPTLALAVDIWSLGCTIIEMLTGKPPWREYEGPTAMFKVLNNTPPIPETLSSEEKIFSSNVLSEILQSGHPQQSCSTMPS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02055 524 ProSiteProfiles Protein kinase domain profile. 264 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02055 524 Pfam Protein kinase domain 265 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02055 524 Gene3D Transferase(Phosphotransferase) domain 1 260 518 - -
Bva06g02055 524 MobiDBLite consensus disorder prediction 1 32 - -
Bva06g02055 524 MobiDBLite consensus disorder prediction 244 266 - -
Bva06g02055 524 MobiDBLite consensus disorder prediction 58 138 - -
Bva06g02055 524 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 191 501 - -
Bva06g02055 524 MobiDBLite consensus disorder prediction 244 263 - -
Bva06g02055 524 ProSitePatterns Protein kinases ATP-binding region signature. 270 293 IPR017441 GO:0005524
Bva06g02055 524 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 191 501 - -
Bva06g02055 524 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 27 191 - -
Bva06g02055 524 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 27 191 - -
Bva06g02055 524 SUPERFAMILY Protein kinase-like (PK-like) 251 497 IPR011009 -
Bva06g02055 524 MobiDBLite consensus disorder prediction 95 109 - -
Bva06g02055 524 SMART serkin_6 264 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02055 Bva-Chr6 13699089 13703342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g02055 46 501 MAP Kinase Kinase Kinase AT5G66850 48.524 8.44e-139 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva06g02055 Pkinase 1.2e-59 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00755 10 6129735 6134828 Bva06g02055 06 13699089 13703342 BWGD
Bva06g02055 06 13699089 13703342 Bva06g02055 06 13699089 13703342 ECH