Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g02041 atGATGAGAAAGACGGCCAAGCTCCTGCTCATCTTTCTCGTGTATGTGTTGCCCGTAGTCTCGGCCCAAGTAAACAACCGCAGCTGCCGCCGAACATGCGGCTCGGACAAAACCTACCGTTACCCTTTCGGCTTCTCCTCCGGATGCGATATCCAACTCAACTGCACCCACGACGCAGTCTTCGTCGAAGAATTCCCAGTACAATCCGTTGGTCAAGATACCATAATCGTTAATGTCATGCCCAAATGCAATCGTCCAATAGATAGCTTCCGCCAACTCTTCGGCCACAAATACGCACCCACCGCGAGGAACGCCCTTCTTCTGCAGAATTGCATCGATCGGATCAGCCCCTGCTTGATACCCAAAACCATGGTGCAGACTCACTTTGACTCGCTAGACTGTACCTCCGGCAGTGGCAATTTGAGCTGCTATTCCGACAATACAACTAGAGGCTTTATGAATTACGATAATATCACCAATAGCCGCTGCCAGTACCTTATGTCTTCCATAATGGCGGATCGTTTATCTAACAGTTCGGCTACGTCGACGCCGGTGTCCTTGGAGGTTGCTGCGGTTGAGCTTGGATGGTGGCTTCAAGGGGATTGCAAATGTTCTTCGGATGCCAATTGTACCAAATTTGACTCCCCCGCGAATGGAAAGCCTGCGTATCGCTGCCGCTGCAATCAAGGCTTCGTTGGCGATGGCTATTCTTCCGGAACAGGCTGCCGGAAAGTCTCCTCAACATGCAACTCAGCCAAGTTTATGTCTGGGCGATGTGGAGGAAAAATCAGATTTGTTGTCATAATTGGAGGAATTGTGTTGGGAATTGCACTGATGATCAGTCTGGGtctaatattttgtttgtatcGCGGGCGTAGAGTCACATTGAGAGGGACAAAGAGGCATTTAACAAAAGCTACCGGGCATTACAGTGTTCCTATTTATTCCTACAAAGATATCGAGAAAGCCACAAATGGCTTCTCAGAGAAACAGAGACTGGGAAATGGGGCATACGGCACAGTATATGCTGGGAAACTTAACGGTGGGGATTGGGTTGCCATCAAGAGGATCAAACATACAGACACAGAAAATATTGAACAAGTAATGAACGAAATCAAGCTGTTTTCCTCCTTGAGCCACCCCAATTTAGTACGCTTGTTGGGTTGCTCCTTAGATTATGGAGAACAAATACTTGTTTATGAATTCATGACCAATGGAACCTTGTATCAACATTTGCACAAAGAGAGAGGCGATGGACTATTATGGCCAATCCGATTAACAATTGCTGCCGAAACAGCCCAAGCTATAGCTTATCTTCACTCTGCCATTAATCCCCCCATATACCATAGAGACATCAAGTCCAGCAACATACTATTGGACGACGGTTTTAGACCCAAAGTAGCTGATTTTGGACTTTCCATACTTGGGATGACTGAGATATCCCATGTTACAACTGCCCCTCGAGGAACACCTGGCTACGTTGATCCACAATACCATCAAGATTTTCAACTCTCTGATAAAAGTGACGTATATAGTTTTGGTGTTGTTTTAGTTGAGATCATAACAGGATTGAAAGTGGTGGATTTCCTGCGCCCTCAAAGTGAGATAAATTTGGCTGCTCTTGCCGCAGATAGGATTGGGAAGGGGCTTGTGGATGAGATTATAGACCCATTCCTTCAAGAAAATCAGGATCCTTACACCCTTCCCTCAATACACAAGGTAGTTGAGCTAGCATTTAGATGCATTGCATTCCACAGGGACATGAGGCCTTCCATGATGGAAGTGGCAGCTGAGCTAGAACATATTAGGCTCAGTGCGTCTTGTTTGACGGTGATGAAGGACAAGCTAGAGGGTAAATTAGGCCTTCTCACGCTGCACACTGATTCTGTTCCATCAAGTTCAACTGAAAGGCCAAAGAATGGTTCCCCAGTTTCGGTGCAAGACCAGGAGCTATGGTTGAGCGAACAGAGCTCTCCTCCTTCATCAAGTAGTTTACTAAGTAAACGAGAGTG 2012 0.4622 MMRKTAKLLLIFLVYVLPVVSAQVNNRSCRRTCGSDKTYRYPFGFSSGCDIQLNCTHDAVFVEEFPVQSVGQDTIIVNVMPKCNRPIDSFRQLFGHKYAPTARNALLLQNCIDRISPCLIPKTMVQTHFDSLDCTSGSGNLSCYSDNTTRGFMNYDNITNSRCQYLMSSIMADRLSNSSATSTPVSLEVAAVELGWWLQGDCKCSSDANCTKFDSPANGKPAYRCRCNQGFVGDGYSSGTGCRKVSSTCNSAKFMSGRCGGKIRFVVIIGGIVLGIALMISLGLIFCLYRGRRVTLRGTKRHLTKATGHYSVPIYSYKDIEKATNGFSEKQRLGNGAYGTVYAGKLNGGDWVAIKRIKHTDTENIEQVMNEIKLFSSLSHPNLVRLLGCSLDYGEQILVYEFMTNGTLYQHLHKERGDGLLWPIRLTIAAETAQAIAYLHSAINPPIYHRDIKSSNILLDDGFRPKVADFGLSILGMTEISHVTTAPRGTPGYVDPQYHQDFQLSDKSDVYSFGVVLVEIITGLKVVDFLRPQSEINLAALAADRIGKGLVDEIIDPFLQENQDPYTLPSIHKVVELAFRCIAFHRDMRPSMMEVAAELEHIRLSASCLTVMKDKLEGKLGLLTLHTDSVPSSSTERPKNGSPVSVQDQELWLSEQSSPPSSSSLLSKRE 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g02041 670 Gene3D Phosphorylase Kinase; domain 1 299 402 - -
Bva06g02041 670 Gene3D Laminin 196 239 - -
Bva06g02041 670 MobiDBLite consensus disorder prediction 628 670 - -
Bva06g02041 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Bva06g02041 670 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02041 670 Gene3D Transferase(Phosphotransferase) domain 1 403 616 - -
Bva06g02041 670 SUPERFAMILY Protein kinase-like (PK-like) 304 600 IPR011009 -
Bva06g02041 670 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 608 IPR045274 GO:0007166
Bva06g02041 670 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Bva06g02041 670 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 21 608 - -
Bva06g02041 670 Pfam Protein kinase domain 327 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g02041 670 SMART serkin_6 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g02041 Bva-Chr6 13608130 13611191 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva06g02041 PK_Tyr_Ser-Thr 1e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02041 06 13608130 13611191 Bva10g00773 10 6219089 6220837 BWGD
Bva06g02041 06 13608130 13611191 Bva06g02041 06 13608130 13611191 ECH