Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01982 ATGGATTCCAATTGCGCAACCTTGAGTTCCAATGCCAATCTAGTCAGAAGAGATAGAGGCAGTGGTTTCTGGGGTGAAACTGTAAGGGGAAGTCTGAACAACAGGTTTTTGAGCATTCGGTCATTCAACAATTCAAAAACCGAAATCAATGTTAGAAAGTTGAAGCCTGGCGTTGCTTACTCCGTTCTCGCTGACGTCAACAATGAGCCTGTGGTAATTCAGCGAAAACCCTTTGCTGAGACTGAGACTTCAAAAGCAGACCCAAAAAAAGTAGCTGCCATAGTATTGGGTGGAGGTGCTGGAACTCGCCTCTTTCCTCTTACTAGCCAAAGAGCCAAGCCAGCGGTTCCAATTGGAGGGTGTTACAGGCTCGTAGATATCCCGATGAGTAATTGCATCAACAGTggcataagaaaaatattcattttaacgCAGTTCAACTCTTTCTCCCTCAATCGTCACCTGTCTcgcatttataattttaaaaatagcgTCAGTTTTGGAGATGAGTTTGTTGAGGTCTTGGCAGCAACTCAAACGCCTGGAGAAGCAGGAAAGAAATGGTTCCAAGGAACAGCTGATGCTGTGAGGCAATTTATGTGGGTCTTTGAGGATGCCAAGCACAAGAATATTGAGCATATATTGATACTTTCTGGCGATCATCTTTACAGAATGGACTATATGAACTTCGTACAGAAACATATCGACACAAATGCTGATATCACAGTTTCGTGTTTACCCATAGATAAGAGCCGTGCATCAGATTATGGGTTGATGAAAATTGATAATACGGGACAGATTTTAGAGTTTGCAGAAAAACCCAAGGGATCAGATCTGGAAGCAATGCAAGTTGACACCACTGTTCTGGGGTTATCTGCACAAGAAGCAAGAGAAAATCCTTACATCGCATCAATGGGTGTTTACGTATTTAGAATTGAAACCTTACTGAAACTATTGAGATGGAGCTGTCCTTCGTGCAATGACTTTGGATCTGAAATTATTCCATCTGCACTGACGGAGCACAAAGTCCAAGCATATTTGTTTGATGAGTACTGGGAAGATATTGGAACTATAAAGTCCTTCTTTGATGCCAATTTGGCCCTAACGAAACAGCCTCCAAAGTTCGAATTCTGTGATCCAAAGACACCTTTCTACACTTCTCCAAGGAACTTACCACCCACCAAAGTAGAAAATTGCAGGATAATGGATGCAATTATTTCTCATGGTTGCTTCTTGAGAGACTGTAGCATTCAAAGTTCTATTGTTGGTGTGCGCTCTCGTCTGGAATCTGGTGCAGAGCTTCAGGAAACCATGATGATGGGTGCAGACTACTACCAAACTGAGTCTGAAATTGTATCTCTTCTGGGAAAAGGGAAGGTTCCTATCGGAATCGGAGAGAATACCAAAATCAGGAAATGTATAATCGACAAGAACGCCAAGATAGGCAAAAATGTGATTATTTCAAACAGTGACGGTGTTCAAGAAGCCGACAGATCTAAGGAAGGATTCTACATTAGGTCGGGCATCACAGTCATCCTCAAGAATGCAACAATCAAAGATGGAACGATTATCTA 1574 0.4117 MDSNCATLSSNANLVRRDRGSGFWGETVRGSLNNRFLSIRSFNNSKTEINVRKLKPGVAYSVLADVNNEPVVIQRKPFAETETSKADPKKVAAIVLGGGAGTRLFPLTSQRAKPAVPIGGCYRLVDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRIYNFKNSVSFGDEFVEVLAATQTPGEAGKKWFQGTADAVRQFMWVFEDAKHKNIEHILILSGDHLYRMDYMNFVQKHIDTNADITVSCLPIDKSRASDYGLMKIDNTGQILEFAEKPKGSDLEAMQVDTTVLGLSAQEARENPYIASMGVYVFRIETLLKLLRWSCPSCNDFGSEIIPSALTEHKVQAYLFDEYWEDIGTIKSFFDANLALTKQPPKFEFCDPKTPFYTSPRNLPPTKVENCRIMDAIISHGCFLRDCSIQSSIVGVRSRLESGAELQETMMMGADYYQTESEIVSLLGKGKVPIGIGENTKIRKCIIDKNAKIGKNVIISNSDGVQEADRSKEGFYIRSGITVILKNATIKDGTII 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01982 524 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 97 116 IPR005836 GO:0005978|GO:0008878
Bva06g01982 524 Gene3D Hexapeptide repeat proteins 390 524 - -
Bva06g01982 524 SUPERFAMILY Nucleotide-diphospho-sugar transferases 89 485 IPR029044 -
Bva06g01982 524 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 91 488 IPR011831 GO:0005978|GO:0008878
Bva06g01982 524 SUPERFAMILY Trimeric LpxA-like enzymes 387 524 IPR011004 -
Bva06g01982 524 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 75 389 IPR029044 -
Bva06g01982 524 CDD LbH_G1P_AT_C 392 518 - -
Bva06g01982 524 Pfam Nucleotidyl transferase 93 370 IPR005835 GO:0009058|GO:0016779
Bva06g01982 524 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 524 - -
Bva06g01982 524 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 188 196 IPR005836 GO:0005978|GO:0008878
Bva06g01982 524 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 524 IPR011831 GO:0005978|GO:0008878
Bva06g01982 524 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 303 313 IPR005836 GO:0005978|GO:0008878
Bva06g01982 524 CDD ADP_Glucose_PP 93 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01982 Bva-Chr6 13342501 13346181 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00841 10 6502504 6507059 Bva06g01982 06 13342501 13346181 BWGD
Bva06g01982 06 13342501 13346181 Bva06g01982 06 13342501 13346181 ECH