Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01964 ATGGAAACTCACTCCGTTTCCAAGTTGTTAATGGTGTTACTGACGGCATTCTTGGTGAGTTCTGAGCTGATCCACTGCAGCGTCACCTACGACAGAAAGGCCATTCTCATCAATGGCCAAAGAAGAATCCTTATCTCTGGCTCCATTCACTATCCTAGAAGCACACCTGATATGTGGGAAGATCTTATACTAAAGGCCAAAGATGGTGGCCTAGATGTCATAGACACTTATGTCTTCTGGAACGTCCACGAACCATCTCCTGGCAATTACAATTTTGAGGGGAGATACGATCTGGTACAATTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGCCCATCTTAGAATAGGGCCTTATGTATGCGCCGAGTGGAACTTTGGAGGGTTTCCTGTTTGGTTGAAGTATGTCCCTGGTATCAGCTTCAGAACGGATAATGGACCTTTCAAgGCAGCAATGCAGGGCTTCACCCAGAAAATTGTCCAGATGATGAAGAACGAAAAACTATTTCAATCTCAGGGCGGCCCAATCATTCTTTCTCAGATCGAGAATGAGTATGGACCAGAGAGTAGGGCACTGGGAAGTGCTGGTCGTGCTTACATAAACTGGGCAGCAAAAATGGCCCTTGGATTGGGTACAGGAGTTCCATGGGTGATGTGCAAGGAAGATGATGCTCCAGATCCTGTGATAAATGCATGTAATGGGTTTTACTGTGATGATTTCTCTCCAAATAAACCCTACAAGCCTAGCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACGGAGTTCGGTGGTCCAATTCACCAACGACCAGTTCAAGATCTAGCATTTGCAGTAGCTCGTTTCATACAAAAGGGCGGGTCATACGTGAATTATTACATGtACCATGGAGGAACTAACTTCGGACGCTCAGCTGGAGGCCCATTCATCACAACAAGCTATGACTATGATGCGCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATATGATCATCTGAAGGAGCTTCATAGAGCTATCAAGCAGTGTGAATATGCTTTGGTTTCTGCGGATCCTACTGTTACATCATTAGGAACTTATCAACAGGCTCATGTTTTTTCTTCCGGACCCGAAAAATGTGCAGCTTTTCTAGCGAACTATCATTCAAAGTCTGCAGCTACGGTGATGTTCAATAACAGGCACTATGATTTACCTCCTTGGTCCATTAGCGTACTCCCTGATTGCAGAACTGCTGTATTTAACACTGCAAATGTGAGAGTCCAAACTTCTCAGATCCAAATGCTGCCTACCAGTTCCAAGTTGTTCTCATGGGAGACCTATGAAGAAGATCTATCTTCTCTGGCGGATGGTTCAAGAGCTATCACAGCTGTTGGTCTGTTAGAACAGCTGAACGTTACCAAAGACAGCAGCGACTATCTATGGTACATAACCAGTGTTGATATAAGTCCATCAGAATCATTTCTTCGAGGAGCACAAAGACCTACTATCAGTGTGCAGTCTGCAGGCCATGCTGTCCACGTGTTTGTCAATGGGCAATTTTCAGGCTCAGCTTTTGGAACAAGGGAACAGAGAAGTTGCACATTTAACGGTCCTGTCAACCTACATGCtggaacaaataaaattgtactACTTAGCGTAGCTGTAGGATTACCGAATGTTGAATGGTCTTACCAGATCGGTCTGAAAGGAGAGGCTATGAATTTGGTCTCTCCGAATGGGTTCTCCTCTGTTGATTGGGTCCGAGGCTCACTGGTTGCACAAGGCCAACAGAATCTGAAATGGCATAAGGCTTATTTTAACGCTCCTGAGGGAAACGAACCATTGGGTTTGGACTTGGGGAGTATGGGGAAGGGTCAAGTATGGATCAACGGACAGAGCATAGGAAGATATTGGATGGCTTATGCAAAGGGTGACTGTAATTCCTGTGCTTACTCTGGGACATTCAGACCCGGAAACTGCCAACTTGGTTGTGGACAACCAACGCAAAGATGGTATCATGTTCCAAGGTCCTGGTTGAAGCCAACAAAGAACTTATTAGTGATTTTTGAAGAATTAAGCGGTGATCCGTGGAAAGTTTCTCTTGTAAAGAGAACGGTACATACGCCTACTGTTACTGAACACGATTCAAAGAATTG 2135 0.445 METHSVSKLLMVLLTAFLVSSELIHCSVTYDRKAILINGQRRILISGSIHYPRSTPDMWEDLILKAKDGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVQFIKTVQKVGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESRALGSAGRAYINWAAKMALGLGTGVPWVMCKEDDAPDPVINACNGFYCDDFSPNKPYKPSMWTESWSGWFTEFGGPIHQRPVQDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYDHLKELHRAIKQCEYALVSADPTVTSLGTYQQAHVFSSGPEKCAAFLANYHSKSAATVMFNNRHYDLPPWSISVLPDCRTAVFNTANVRVQTSQIQMLPTSSKLFSWETYEEDLSSLADGSRAITAVGLLEQLNVTKDSSDYLWYITSVDISPSESFLRGAQRPTISVQSAGHAVHVFVNGQFSGSAFGTREQRSCTFNGPVNLHAGTNKIVLLSVAVGLPNVEWSYQIGLKGEAMNLVSPNGFSSVDWVRGSLVAQGQQNLKWHKAYFNAPEGNEPLGLDLGSMGKGQVWINGQSIGRYWMAYAKGDCNSCAYSGTFRPGNCQLGCGQPTQRWYHVPRSWLKPTKNLLVIFEELSGDPWKVSLVKRTVHTPTVTEHDSKN 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01964 711 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Bva06g01964 711 SUPERFAMILY Galactose-binding domain-like 402 548 IPR008979 -
Bva06g01964 711 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 590 604 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PRINTS Glycosyl hydrolase family 35 signature 617 633 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Bva06g01964 711 Gene3D - 578 703 - -
Bva06g01964 711 PANTHER BETA-GALACTOSIDASE 554 704 - -
Bva06g01964 711 PANTHER BETA-GALACTOSIDASE 3 553 - -
Bva06g01964 711 PANTHER BETA-GALACTOSIDASE RELATED 554 704 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 PANTHER BETA-GALACTOSIDASE RELATED 3 553 IPR001944 GO:0004553|GO:0005975
Bva06g01964 711 Gene3D Glycosidases 24 344 - -
Bva06g01964 711 SUPERFAMILY Galactose-binding domain-like 554 701 IPR008979 -
Bva06g01964 711 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01964 Bva-Chr6 13249740 13254601 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00864 10 6625761 6631366 Bva06g01964 06 13249740 13254601 BWGD
Bva06g01964 06 13249740 13254601 Bva06g01964 06 13249740 13254601 ECH