Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01960 ATGGACGTCGATCCGCGCCAATACGAAAACCTTGCTATAAATGACAGTGATGTTCACAATGTTGTTCTCTCATATCTCATTCATAACTGCTATAAAGAATCGGTGGAGTCATTCATTGCATGCACTGGGATGAAGCAGCCCACAGATTATTTAGAGGacattgagaaaagaaaaaGAATTTTTCACTTTGCACTAGAGGGAAATGCACTTAAGGCGATTGAGCTAACTGAACAGCTAGCTTCAGACAttctagagaaaaataaggaCTTGCGGTTTGATCTTCTAAGCCTTCATTTTGTGGAGCTTGTATGCTCTAGGAAATGCACAGAAGCTTTGGAGTTTGCTCAGACTAAGTTGAGCCCTTTTGGGAAGGAGGACAAATATATGGAAAAGCTCGAGGATTTTATGGCCCTTCTTGCTTATAAGGAGCCTGAGAAATCCCCAATGTTTCATCTCCTTAGCTTGGAATACCGGCAGCAGGTTGCAGATGGTTTAAACAGAGCTATCCTCGCACACTCAAATCTTCCAAGCTATACAGCAATGGAGAGGCTGATACAGCAGACTACTGTAGTCAGACAATGCTTAACCCAAGAAGCTGGCAAGGATGGTCCTCCACCGTTTTCCTTGAAGGATTTTCTCAAAAGTTG 647 0.4111 MDVDPRQYENLAINDSDVHNVVLSYLIHNCYKESVESFIACTGMKQPTDYLEDIEKRKRIFHFALEGNALKAIELTEQLASDILEKNKDLRFDLLSLHFVELVCSRKCTEALEFAQTKLSPFGKEDKYMEKLEDFMALLAYKEPEKSPMFHLLSLEYRQQVADGLNRAILAHSNLPSYTAMERLIQQTTVVRQCLTQEAGKDGPPPFSLKDFLKS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01960 215 PANTHER RAN BINDING PROTEIN 9-RELATED 8 214 - -
Bva06g01960 215 SMART toby_final6 106 201 IPR013144 -
Bva06g01960 215 SMART ctlh 53 110 IPR006595 -
Bva06g01960 215 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 30 8 214 - -
Bva06g01960 215 Pfam CTLH/CRA C-terminal to LisH motif domain 54 191 IPR024964 -
Bva06g01960 215 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 53 110 IPR006595 -
Bva06g01960 215 ProSiteProfiles LIS1 homology (LisH) motif profile. 14 46 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01960 Bva-Chr6 13236357 13239510 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00866 10 6637446 6640176 Bva06g01960 06 13236357 13239510 BWGD
Bva06g01960 06 13236357 13239510 Bva06g01960 06 13236357 13239510 ECH