Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01949 ATGGCTGGGTTCTTCTCTCTAGGCCCACAAAGCAAACAGGAAGATcagcaaaaggaagaaaacagtAATAATAGCTTCTTCTTGTTCAGGAACGAAGAGATCTACAACAAGAGATTTGAGATATGGCCGCAATCTATTCACCCCAACCATAACTCGAGTAACTACTACTCGTTTGGAGTGGGTCCTAGTCGAAGAAACTCCTCCTCCGACGTTTCTGATGATCACTCTACGAGATTCGGATTCACGGTGATGAGGTCTGGAGGTCTAGGTGGTGGAGGAGGAATGAACTGTCAGGATTGTGGGAACCAAGCTAAGAAAGATTGTCCGCATCTTAGATGCAGGACTTGTTGCAAGAGCCGAGGGTTGCAGTGCCAAACACACGTCAAGAGCACTTGGGTTCCAGCAGCTAAACGCCGTGAAAGACAACAACAACTCTCGTCGTTGCAGCACCAGCAGTTACAGAATCAACAACACCAAGAGCACCTTCGAGGAGAGAATTCAAAACGGCACAGAGAAAATCAAGCCACGGGCTCCTTAGACTGCGTTCCATTACCCATCACCACCACAGGGTTGGAACTGGGACAATTCCCATCTCAACTGAACTCTCCTGCTGTGTTTCGTTGTGTGAGAGTAAGCCCAATGGAGAATACTCCGGATGAGCAATACGCATATCAAACAGCTGTAAACATCGGAGGGCATGTTTTCAAGGGAATTTTGTATGATCAAGGCGCTGAAGGTCCTTACACCACAGGTGGCCATGGTGAGAGCCCCTCCGGTGGAGGTGAAGCTCAACAACTTAATCTGATAACAGCCGCAGCAACCAACACCACTACAACCACCGGCAACCCATTTGACCCTTCACTCTACCCGGCTCCACTCAACACATTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGATCCTA 926 0.4795 MAGFFSLGPQSKQEDQQKEENSNNSFFLFRNEEIYNKRFEIWPQSIHPNHNSSNYYSFGVGPSRRNSSSDVSDDHSTRFGFTVMRSGGLGGGGGMNCQDCGNQAKKDCPHLRCRTCCKSRGLQCQTHVKSTWVPAAKRRERQQQLSSLQHQQLQNQQHQEHLRGENSKRHRENQATGSLDCVPLPITTTGLELGQFPSQLNSPAVFRCVRVSPMENTPDEQYAYQTAVNIGGHVFKGILYDQGAEGPYTTGGHGESPSGGGEAQQLNLITAAATNTTTTTGNPFDPSLYPAPLNTFMAGTQFFPPPRS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01949 308 MobiDBLite consensus disorder prediction 161 175 - -
Bva06g01949 308 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 96 138 IPR006510 -
Bva06g01949 308 Pfam Domain of unknown function (DUF702) 94 245 - -
Bva06g01949 308 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 306 - -
Bva06g01949 308 MobiDBLite consensus disorder prediction 137 181 - -
Bva06g01949 308 MobiDBLite consensus disorder prediction 140 160 - -
Bva06g01949 308 MobiDBLite consensus disorder prediction 1 23 - -
Bva06g01949 308 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 306 IPR007818 GO:0003700|GO:0006355
Bva06g01949 308 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 195 243 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01949 Bva-Chr6 13186024 13188637 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Bva06g01949 DUF702 8.3e-65 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00873 10 6680667 6682373 Bva06g01949 06 13186024 13188637 BWGD
Bva06g01949 06 13186024 13188637 Bva13g01757 13 14188445 14189621 ECH
Bva06g01949 06 13186024 13188637 Bva06g01949 06 13186024 13188637 ECH