Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01938 ATGTCTTTATCCCCTCTGTTCTTTCACATTCTGATTCTCCTCGCCGCCATACCATCGCCGTCGGAAGCTGGCAGCGGGAAATGGCAACTCTTACATAAAAGCATTGGCATTGTCGCTATGCACATGCAGTTACTGCACAACGACCGCGTTGTCATTTTCGACCGCACTGACTTTGGTTTATCCAATTTGAGCTTGCCTAATGGCAGATGTCGTCGGAACCCAAGAGAAATTGTTGTCAAAACTGACTGCACAGCTCATTCCATAGAATACGACGTCGCATCAAACACTTTCAGGGCACTATTCGTTCAGACTGACGTCTGGTGTTCTTCTGGTGCAGTTTCTTCTGATGGTCGTCTGATACAGACAGGTGGCTTCAATGACGGAGAGCGTGCGGTCAGGATTTTCAGTCCTTGCCCCACCTGTGACTGGCAAGAAATTGCTTCCAGACTAGCTGCTCGTAGATGGTATGCTACCAATCATATTCTGCCAGACGGACGGCAGATTATCATCGGTGGCAGAAGGGCATTCAACTATGAATTTTATCCCAAGACAAAAGCAACTGCCAAAAACGCTTACAGTCTACCATTCCTCGTACGGACCAATGATCCCGGTGTGGAGAACAACTTGTACCCGTTTGTTTTTCTCAACGTGGACGGTAACTTATTTATCTTCTCCAATAACCGATCGATCTTATTCGACTATAACAAAAACAGGGTGGTGAAGACTTACCCAGACATACCAGGTGGAGATCCTAGATGTTATCCCAGTACAGGTTCCGCGGTGTTGCTGCCTTTGCATTTACGAGCGCCATCTGACGTTCGTGCTGAGGTTTTGGTTTGTGGTGGAGCCCCAAGAGGTTCTCATGAGCAGACGCTCAAACGCAAATTTATCGGAGCCTTGAATACATGTGGTCGGATCGAGATCACTGACCCTAACCCACGGTGGGTCATGGAGACAATGCCTGAAGGTAGGGTCATGAGTGACATGATAATTCTTCCAAACGCCCAAGTTCTGATCATAAACGGAGCAGCTCTGGGCACTGCTGGGTGGGAAAGCGGGCGGAACCCGGTGTTGAACCCGTTAATATATAAAACCGATAGCCCAGCCGGGTGTCGGTTTGAATCACAAAACCCGTCAAACATTCCCCGAATGTACCATTCAACGGCCGTTTTGTTACGCGACGGTCGCGTGCTAGTTGGTGGCAGCAATCCTCACACATGTTACAATTTCACAAACGTCCTATATCCAACTGAATTAAGTTTAGAAGCATTCTCCCCTTGGTATTTGGACCCTCAGTTTTCAGGTTTACATTCAAATATGATAGCTCCGACTTCTCAAACTAAACTCAAGTACAACCAGAAATTGATTATCCGGTTCCGGATGACGGGAAAATTGACCCAAAATCGGGTGTCGGTGACAATGTTGGCACCACCTTTCAACACGCACTCATTTTCAATGAATCAGAGGTTGCTTGTACTAGGAACAAGCAAACTGACAACTTTGGGTAGATCAGAGTATCAAGTTGAGGTCACAACACCCTTTTCGGCTATTCTTGCGCCACCCGGTTTCTATCTGCTATTTGTGGTCCATCAACAAATTCCCAGCGTGGGCATTTGGGTTCAAATactatg 1631 0.4697 MSLSPLFFHILILLAAIPSPSEAGSGKWQLLHKSIGIVAMHMQLLHNDRVVIFDRTDFGLSNLSLPNGRCRRNPREIVVKTDCTAHSIEYDVASNTFRALFVQTDVWCSSGAVSSDGRLIQTGGFNDGERAVRIFSPCPTCDWQEIASRLAARRWYATNHILPDGRQIIIGGRRAFNYEFYPKTKATAKNAYSLPFLVRTNDPGVENNLYPFVFLNVDGNLFIFSNNRSILFDYNKNRVVKTYPDIPGGDPRCYPSTGSAVLLPLHLRAPSDVRAEVLVCGGAPRGSHEQTLKRKFIGALNTCGRIEITDPNPRWVMETMPEGRVMSDMIILPNAQVLIINGAALGTAGWESGRNPVLNPLIYKTDSPAGCRFESQNPSNIPRMYHSTAVLLRDGRVLVGGSNPHTCYNFTNVLYPTELSLEAFSPWYLDPQFSGLHSNMIAPTSQTKLKYNQKLIIRFRMTGKLTQNRVSVTMLAPPFNTHSFSMNQRLLVLGTSKLTTLGRSEYQVEVTTPFSAILAPPGFYLLFVVHQQIPSVGIWVQIL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01938 543 CDD E_set_GO_C 447 542 IPR015202 -
Bva06g01938 543 Gene3D Immunoglobulins 440 543 IPR013783 -
Bva06g01938 543 SUPERFAMILY Galactose oxidase, central domain 88 430 IPR011043 -
Bva06g01938 543 Gene3D - 22 432 IPR037293 -
Bva06g01938 543 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 17 542 - -
Bva06g01938 543 Pfam Glyoxal oxidase N-terminus 40 282 IPR009880 -
Bva06g01938 543 PANTHER SECRETED PROTEIN-RELATED 17 542 - -
Bva06g01938 543 SUPERFAMILY E set domains 446 542 IPR014756 -
Bva06g01938 543 Pfam Galactose oxidase-like, Early set domain 446 542 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01938 Bva-Chr6 13122189 13123964 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01938 06 13122189 13123964 Bva10g00887 10 6766430 6768076 BWGD
Bva06g01938 06 13122189 13123964 Bva06g01938 06 13122189 13123964 ECH