Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01356 ATGGGTTTTTCTTCTGTGCACGTCTGCATGGAATCATCAGATCATTGGCTGCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCGCCATCTGGGGAGATGCTTACGTGCTCGAGACCCTTGATAGAGAGGAGACTGAGACCACCCCACGACCAAGCTCTCAAGTGCCCGAGGTGTGATTCAACTCACACCAAGTTCTGCTACTACAACAACTACAGTCTCACTCAACCAAGGTACTTCTGCAAAACTTGCCGAAGGTATTGGACCAAAGGAGGCACTCTCAGAAACATCCCAGTTGGTGGTGGTTGtagaaagaacaagaaagtTTCTTCCAAGAAATCCAATGACCCTTCTTCCCTTAATAATCAAACCCAACCACAACCTGGATCTTCCTCCTATCACCACAACCCCAAAGATCTTCAACTCTCTTTCCCAGATATGCAATTTTCCCACCTCAGCAATTTACTTGGGGCCAATGGGGTACTGGGAAACCCTAGTTTCAACATCGGCGTGCTCGAGAACCCTAGGCCTATTGACTTCGTGGAAAGCTCTAAGCTGGAAGGCCTAATTGGGGCTTCTTCTAGAAATTTCGATTTTATGGGAAATAGTGATCATATGGGCATGGGTATTGGACTTGGAGATATGAATGGTCATAATGGGATGCAGCCAAATTTTAATGGCCTTTGCTCAACGCCATTCGGGGGAATGTCCCTTGATGCCAACAATGGTGGGACTAATTACATAATGGACTCTTGCCAGCGACTGATGTTGCCGTATGATCATGAGGACCAAAATGCCGCAATTGATGTGAAGCCAAACCCTAAACTCTTGTCCCTTGAATGGCAAGATCAAGGCTGCTCTGACGCTGGGAAAGAATCATTTGGGTACCTCAACGGTCTAGGATCATGGACCGGCATAATGAACGGCTATGGAACATCCACAACAAACCCTTTGGTCTG 965 0.4642 MGFSSVHVCMESSDHWLQGTIHEESGMDSSSPSGEMLTCSRPLIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLTQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDPSSLNNQTQPQPGSSSYHHNPKDLQLSFPDMQFSHLSNLLGANGVLGNPSFNIGVLENPRPIDFVESSKLEGLIGASSRNFDFMGNSDHMGMGIGLGDMNGHNGMQPNFNGLCSTPFGGMSLDANNGGTNYIMDSCQRLMLPYDHEDQNAAIDVKPNPKLLSLEWQDQGCSDAGKESFGYLNGLGSWTGIMNGYGTSTTNPLV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01356 321 Pfam Dof domain, zinc finger 53 110 IPR003851 GO:0003677|GO:0006355
Bva06g01356 321 PANTHER - 12 315 - -
Bva06g01356 321 MobiDBLite consensus disorder prediction 115 140 - -
Bva06g01356 321 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 12 315 IPR045174 GO:0003700|GO:0006355
Bva06g01356 321 MobiDBLite consensus disorder prediction 101 140 - -
Bva06g01356 321 ProSiteProfiles Zinc finger Dof-type profile. 56 110 IPR003851 GO:0003677|GO:0006355
Bva06g01356 321 ProSitePatterns Zinc finger Dof-type signature. 58 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01356 Bva-Chr6 10120684 10122573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g01356 1 321 C2C2-Dof Transcription Factor Family AT5G62940 40.657 6.23e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva06g01356 zf-Dof 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g01356 - - gmx:778107 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00367 05 1821531 1823313 Bva06g01356 06 10120684 10122573 PCT