Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g01164 ATGGTAAAGATCTGCGGCATTGGAGCAGGGTATGTTGGGGGTCCTACAATGGCAGTGATTGCCCTCAAGTGCCCCTCAATTGAAGTGGCTGTGGTTGACATCTCTCACTCTCGCATATCAGCCTGGAACAGTGATCAGCTTCCCATTTATGAGCCTGGTCTTGAAGAAGTGGTGAAGGAATGTAGAGGAAAGAACCTCTTGTTCAGCACCGATGTGGAAAAACATGTCTCGGAGGCagaaatagtttttctttcagTAAACACTCCAACAAAAGCCAGAGGACTTGGAGCTGGCAAAGCTGCAGACTTGACATACTGGGAAAGTGCAGCTAGGATGATTGCTGATGTGTCACAGTCAAACAAGATTATTGTCGAGAAGTCCACTGTCCCGGTGAGAACGGCTGAGGCAATTGAGAAAATTCTAGCCCATAATAGCAAAGGCATCAACTATCAAATACTCTCAAACCCAGAATTTCTTTCTGAGGGAACTGCTATTCAGGACCTTCTAAATCCTGATAGAGTACTTATTGGAGGGAAGGAAAGCCCTGAAGGCCAAAAGGCAATTCAAGCATTGAAGGATATATACGCTCAATGGGTACAAGAGGACAAAATTATAACAACCAATCTTTGGTCAGCAGAGCTGTCCAAGTTAGCTGACAACGCCTTTCTGGCTCAAAGGATCTCATCTATCAATGCTATGTCAGCTCTCTGTGAGGCAACAGGAGCAGAAGTTTCACAAGTTTCCCTTGCTCTCAGTAAAAACACCAAAATTGGGTCTAAATTTCTCAATGCCAGTGTTGGCTTTGGTGGGTCTTGCTTCCAAAAGGACATTCTCAACTTGGTCTATATCTGTGAGGGCAACGGCCTCAGTGAAGTTGCAAATTACTGGAAACAGGTGATCAATGTGAATGACTACCAAAAGAATCGTTTTGTGAAAAGGGTTATCTCCTCCATGTTTAATACAGTTTCAGGAAAGAAGATTGCAGTTCTGGGATTTGCATTCAAGAAAGATACCAGTGACACAAGAAAAACTCCTGCAATTGATGTTTGTAAAGGCCTTTTAGGAGATGAAGCACGCTTGAGCATATATGATCCAAGGGTTACTGAAGATCAGATTCAAAGGGATTTGTCAACGAACAACGTTGAGTGGGATCATCCAATTCACCTGCATCCATTGAATCCCACTATGGTGAAACAGGTTAGCATAGTTAGGGATGCTTATGAGGCAACTAAAGATGCTCATGGAATCTGCATTCTTACTGAGTGGGACGAATTTAAAACACTTGATTATCAGAAGATATATGATGATATGCAGAAACCTGCCTTTATATTTGACGGTAGGAACATTTTGAACGTCGGGAAGCTGAGGGAGATTGGATTTATTGTATACTCAATTGGGAAGCCATTAGACTCATGGCTGAAGCCCGAAGGACATGCATACAGTGGCGTGATGGATATTATCCCTTA 1466 0.4263 MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSDQLPIYEPGLEEVVKECRGKNLLFSTDVEKHVSEAEIVFLSVNTPTKARGLGAGKAADLTYWESAARMIADVSQSNKIIVEKSTVPVRTAEAIEKILAHNSKGINYQILSNPEFLSEGTAIQDLLNPDRVLIGGKESPEGQKAIQALKDIYAQWVQEDKIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQVSLALSKNTKIGSKFLNASVGFGGSCFQKDILNLVYICEGNGLSEVANYWKQVINVNDYQKNRFVKRVISSMFNTVSGKKIAVLGFAFKKDTSDTRKTPAIDVCKGLLGDEARLSIYDPRVTEDQIQRDLSTNNVEWDHPIHLHPLNPTMVKQVSIVRDAYEATKDAHGICILTEWDEFKTLDYQKIYDDMQKPAFIFDGRNILNVGKLREIGFIVYSIGKPLDSWLKPEGHAYSGVMDIIP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g01164 488 PANTHER UDP-GLUCOSE 6-DEHYDROGENASE 3 1 475 - -
Bva06g01164 488 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 463 IPR036220 -
Bva06g01164 488 PIRSF UDPglc_DH_euk 1 479 IPR028356 GO:0003979
Bva06g01164 488 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 451 IPR014027 GO:0016616|GO:0051287
Bva06g01164 488 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Bva06g01164 488 PIRSF UDPglc_GDPman_dh 2 467 IPR017476 GO:0016616
Bva06g01164 488 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Bva06g01164 488 Gene3D - 1 208 - -
Bva06g01164 488 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 475 IPR028356 GO:0003979
Bva06g01164 488 SMART UDPG_MGDP_dh_C_a_2_a 328 452 IPR014027 GO:0016616|GO:0051287
Bva06g01164 488 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Bva06g01164 488 Gene3D - 209 240 - -
Bva06g01164 488 TIGRFAM NDP-sugDHase: nucleotide sugar dehydrogenase 3 448 IPR017476 GO:0016616
Bva06g01164 488 Gene3D - 241 479 - -
Bva06g01164 488 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 214 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g01164 Bva-Chr6 9185892 9188117 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01164 06 9185892 9188117 Bva05g00412 05 2034011 2037988 ECH
Bva03g02076 03 18366889 18369582 Bva06g01164 06 9185892 9188117 ECH
Bva04g00326 04 1954902 1957760 Bva06g01164 06 9185892 9188117 ECH
Bva06g01164 06 9185892 9188117 Bva06g01164 06 9185892 9188117 ECH