Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00586 ATGCAGGAAATACATTCCATGGGAGGAACTAGATTCTTTGGCGGCGGTGGTGGTGGAGACAGGAGGCTGAGACAGCAACACCACCAGAATCACCAGGCATTGAAGTGCCCCAGATGTGACTCTCTCAACACCAAATTCTGTTATTACAATAACTACAATCTCTCTCAGCCACGCCATTTCTGCAAGAGCTGCCGTAGATACTGGACCAAAGGCGGGGTTCTTCGCAACGTACCCGTCGGAGGTGGTTGCCGGAAATCAAAGCGCTCCAAGCCCAAAAACTCTTCCGCATCAGAAACCTCTTCTGCACCGGCACCGGTGCCTCCATCGCAACCATCAGAGCAAGAGCGGAAGTCCAACTCTCATTCCAGTAGTGAAAGCTCAAGCCTCACCGCCGCCAACACCACAGCCGCTGCCACGGAGGCCTTATCGGCTCCGTCGTCAAACTCTGCGTCAAAGAATAACAATTTGCCGGAGAATATTCGGGAGTCCAAGTTCTTGATCAACCACAATTCAAACCCTAATTTGGAGCAGAGCGGTCTGCCGGATCAAGGAGGAGACTGCAGTGGTATTTTCTCAGATATTGGGAGCTTTACAAGTTTGATCGCTTCGACCACCACCAACGATACATTGGATTTTGGATTTGGGAACACGGCCGATGCGTCGCCGTTTCGATTCACAACTCAAGGAGGGAACGATCAACTATCAGCTCTTCAGAATACTCATCAGTGGCAACATAACAAGGTAATGAGCACGAGCGATCATCTGGAGTTCAAGTTATCGGAGATCTCGGACGGGTCGTTGCTTGATCAGACGGTTCCCATTGAATTGTCGGCGTTGCAAAGCAAACCCAATAATGGGGGATTCGGATCCTTGGATTGGCACGGTGGTGCGGATCAAGGTTTGTTCGATCTTCCTAACACCATAGATCAAGCTTACTGGAGCCAGACTAATTGGACTGATCAAGACAACCTCAATTCTAGTCTCTATCTACCCTG 995 0.5005 MQEIHSMGGTRFFGGGGGGDRRLRQQHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKSKRSKPKNSSASETSSAPAPVPPSQPSEQERKSNSHSSSESSSLTAANTTAAATEALSAPSSNSASKNNNLPENIRESKFLINHNSNPNLEQSGLPDQGGDCSGIFSDIGSFTSLIASTTTNDTLDFGFGNTADASPFRFTTQGGNDQLSALQNTHQWQHNKVMSTSDHLEFKLSEISDGSLLDQTVPIELSALQSKPNNGGFGSLDWHGGADQGLFDLPNTIDQAYWSQTNWTDQDNLNSSLYLP 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00586 331 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 321 IPR045174 GO:0003700|GO:0006355
Bva05g00586 331 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Bva05g00586 331 MobiDBLite consensus disorder prediction 111 156 - -
Bva05g00586 331 PANTHER DOF ZINC FINGER PROTEIN DOF5.4 8 321 - -
Bva05g00586 331 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Bva05g00586 331 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Bva05g00586 331 MobiDBLite consensus disorder prediction 78 156 - -
Bva05g00586 331 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00586 Bva-Chr5 2907705 2909155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00586 20 331 C2C2-Dof Transcription Factor Family AT5G60850 44.654 7.53e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva05g00586 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00586 - - zju:107419070 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00586 05 2907705 2909155 Bva05g00586 05 2907705 2909155 ECH