Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00367 ATGCACATCTGCATGGAATCGTCAGATCATTGGCtgcagCAGGGCACAATTCACGAGGAGTCTGGAATGGATTCTTCTTCACCATCCGGGGAGATGCTCACGTGCTCAAGACCCTTGATAGAGAGGAGGCTAAGACCCCCGCACGACCAAGCTCTCAAGTGCCCAAGGTGTGATTCAACTCACACCAAGTTCTGCTACTACAACAACTACAGTCTCTCTCAGCCAAGGTACTTCTGCAAGACTTGCCGAAGGTACTGGACCAAAGGAGGCACTCTTAGGAACATCCCAGTTGGTGGTGGCTGtagaaagaacaagaaagtTTCTTCTAAGAAATCCAATGACCCATCAACACTTAATAATCAAAACCAACCACAATCTGGACCCTCTTCCTATCACCACAGCCCCAAAGATCTTCAACCCTCTTTCCCGGATTTGCAATTTTCCCACCTCGGTAATTTACTTGGGACCAATGGGGCACTCGGAAACCCTAGTTTTAACCTTGGTATGCTGGAGACCCCTAGGCCTATTGATTTCATAGAAAGTTCCAAGTTGGAAAGCCTTGTTGGGGCTTCTTCTAGAAATTTCGATTTTATGGGAAATAATGATCATATGGGTATGGGTGTTGGGCTTGGAGATATAAATGGTCATAATGGGTTGCCACTAAATTTTCATGGCCTTTGCTCTTCGCCATTTGTGGGAATGTCCCTTGATGGTAACAATGGTGGGTCTAATTTAGTAATGGAGTCTTGCCAGCGACTGATGTTGCCATATGATGCTCATGAGGACCAAAATGCGGCAATTGATGTGAAGCCAAACCCTAAGCTTTTGTCCCTTGAATGGCAAGATCAAGGTTGTTCAGACGTTGGGAAAGAATCATTTGGATACCTTAACGGTCTAGGATCATGGTCCGGCGTGATGAACGGCTACGGATCATCCACAACAAACACATTGATCTA 956 0.4508 MHICMESSDHWLQQGTIHEESGMDSSSPSGEMLTCSRPLIERRLRPPHDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDPSTLNNQNQPQSGPSSYHHSPKDLQPSFPDLQFSHLGNLLGTNGALGNPSFNLGMLETPRPIDFIESSKLESLVGASSRNFDFMGNNDHMGMGVGLGDINGHNGLPLNFHGLCSSPFVGMSLDGNNGGSNLVMESCQRLMLPYDAHEDQNAAIDVKPNPKLLSLEWQDQGCSDVGKESFGYLNGLGSWSGVMNGYGSSTTNTLI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00367 318 MobiDBLite consensus disorder prediction 97 138 - -
Bva05g00367 318 MobiDBLite consensus disorder prediction 111 136 - -
Bva05g00367 318 Pfam Dof domain, zinc finger 49 106 IPR003851 GO:0003677|GO:0006355
Bva05g00367 318 ProSiteProfiles Zinc finger Dof-type profile. 52 106 IPR003851 GO:0003677|GO:0006355
Bva05g00367 318 PANTHER - 10 311 - -
Bva05g00367 318 ProSitePatterns Zinc finger Dof-type signature. 54 90 IPR003851 GO:0003677|GO:0006355
Bva05g00367 318 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 311 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00367 Bva-Chr5 1821531 1823313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00367 1 318 C2C2-Dof Transcription Factor Family AT5G62940 40.933 4.32e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva05g00367 zf-Dof 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00367 - - gmx:778107 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00367 05 1821531 1823313 Bva06g01356 06 10120684 10122573 PCT