Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01711 ATGGCATATTTCTTTGGCTACTTTAGAATGGCACTATCGTTTTCAACATCATGGGTTGGCTCCCACAATCCGCAGCTTCCACCGCCAACCCAGCCGCCACCTCCAACAGTCATTGTTGGAGGTGGTGGAAGCTCAATCAGATTAGGATCAATGTCTGAACGAGCTCGGCTAGCGAAGACACCGCAGCCGGAGGCAGCACTCAAGTGTCCACGATGTGAATCAGCGAACACCAAGTTCTGTTACTACAACAATTACAGCCTTTCGCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGTTACTGGACAAGAGGGGGCGCACTGAGGAATGTTCCGGTGGGCGGTGGCTGCAGAAGGAACAAAAGAAACAGCAAAGGAAGCAGTAGATCGAAATCTCCTGCCAAAGCTGATGATCGCCATGGTGGTTTGAACTCTTCAAGGGGAAATTCTTCTAGTAACTGCACTAGTGGTGTGATAGGTCATTTGCCAACTCCATCCTCATCTCAATTACCCTTCTTGCCTACTTTGCATCAGTTTTCTAACTACGTTTCTGGAGAAACTGGGCTTCATTTCGGTGCGATTTCGCCTTCCATTTTAGCCACCAATGGCAATACAAGCAGCAGTGATGTTCAATTTCACATTGGTAGGGGAAATGGTGGTTCTCTATTGTCAAATGGCCAAAATGAGCAATGGAGTTTGCCAAATCTGCAAcaatttcatcatcatcatcagcagcagcagcatcaacagcagcagcagctgTTTCCTTTCTTGACTAATTTGGAATCGCCAATTGGGTTATTTCAGCTTGAAGGAGAAAATATTCACCCGGGAAGTTATGCTGGACAAGGAAGCAGGCTTCGTCCCAAGACGTTAGATTCTGGTGTTAGTGAAATGCCTCAGCATACTTCATTGAAAATGGAGGAGAATGAAGGTCTGAGTTTGTCAAAAAATCTTTTACCTAGTTCTGGAAATGATCAATTCTGGAGTGGTGGTGGTAATGCATGGAATGACATCCCCAGTTTCACTTCTTCCACAAGTCATATGTTATG 1049 0.4385 MAYFFGYFRMALSFSTSWVGSHNPQLPPPTQPPPPTVIVGGGGSSIRLGSMSERARLAKTPQPEAALKCPRCESANTKFCYYNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRNSKGSSRSKSPAKADDRHGGLNSSRGNSSSNCTSGVIGHLPTPSSSQLPFLPTLHQFSNYVSGETGLHFGAISPSILATNGNTSSSDVQFHIGRGNGGSLLSNGQNEQWSLPNLQQFHHHHQQQQHQQQQQLFPFLTNLESPIGLFQLEGENIHPGSYAGQGSRLRPKTLDSGVSEMPQHTSLKMEENEGLSLSKNLLPSSGNDQFWSGGGNAWNDIPSFTSSTSHML 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01711 349 MobiDBLite consensus disorder prediction 142 159 - -
Bva04g01711 349 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 28 346 - -
Bva04g01711 349 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 28 346 IPR045174 GO:0003700|GO:0006355
Bva04g01711 349 ProSitePatterns Zinc finger Dof-type signature. 69 105 IPR003851 GO:0003677|GO:0006355
Bva04g01711 349 ProSiteProfiles Zinc finger Dof-type profile. 67 121 IPR003851 GO:0003677|GO:0006355
Bva04g01711 349 Pfam Dof domain, zinc finger 66 121 IPR003851 GO:0003677|GO:0006355
Bva04g01711 349 MobiDBLite consensus disorder prediction 111 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01711 Bva-Chr4 18249248 18253977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01711 34 348 C2C2-Dof Transcription Factor Family AT3G55370 39.394 8.23e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bva04g01711 zf-Dof 1.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01711 - - qsu:112038371 338.191