Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00844 ATGGATCAGAAAGTGCACATGCTTAGTCCAATTCCCTCGCACGTAGATCTAGTACTACCTTTCCGTTACTGTCCCCAAAGCCACGGTTTTCAGAGTGAGCAGAGAGACAGAATCACAGGGGTGCCTCCTCCGATGGACCCACCACCGGCAGCAGTGCCAACTCTCGCCGCCGCAACCAACCAAGTCCAAGTGAACCACCCTGACTCACTGGAGTCCTCTCCCCGCGCCCGCATTGGTGAGACATTGGCCGATGAGCCTCTTCCCCCAGTCCCCGGCGCCAAGCTCCGCCTAATGTGCAGCTATGGCGGGCACATCATGCCTCGCCCACATGATAAAACTCTCTGCTACGTCGGCGGTGACACCCGCATCGTCGTCGTTGATCGACATTCCTCCCGGAAAGACCTCTGTGGACGTCTCTCTCGTAGCCTCCTCCATGGCCGACCCTTCACCCTTAAATATCAATTGCCCAATGAAGATCTTGACAATCTCATCACAGTGTCCACCGATGAAGACCATGAAAACATGATTGAAGAGTATGACCGCATAACCGCTGCCTCTTCACTGAAACCTTCGCGCTTGAggcttttcctcttcttcaataCGCCCGAAACCGCCGTCACCATGGGTTCTCTTCTCGACGATGCCAAGTCAGAGACTTGGTTCGTGGATGCTCTCAACAATTCCGGTATTCTCGACAGGGTGGTTTCAGATTCTGTTGCTGTGGGTGGCTTGGTGAACCTTGACCGTGTTCCTGCTAGTGATTCTAGCAATAGTTTAGAGGCTCAGGCTGCGGAATCTCTCGGTGAAAACAACAAACAGGTTAAGGGCGTGCCTGATGTACATTCATTACCCGAATCACCTATGGTGTTGGAGAACAGTTCATCATATGGGTCATCTCTTTCCTCGCCTTCAATGGCTAATCTACCTCCGATTCGGGTTCGCGTGGAGGATAATGGTAGTAGACTGCAACAAGAACAGAGGCCCGGAATCGAGGAGCAATTTTCTCAAATGACCTTTGCTACCAGTGGGATGAAGCAAGAGGATGGGTATGGCAATAGCGTTGTGCCTCCTCCTCCCATGCCTTCAATTCCTTCAATTGTGGCTGTGCCATCTTCAGAATCCATGGTTGTTGGTGAAAATACGAACCGGATTATCTCTGACGATGAGAGATCAGATAAGGGTGCCCCTGCGGGGTGGCGAAAACCCCCTTTACCTGTGCAGATTGTGCAGCCAAGAACTAGTGGTGGTTTTGCTGGCACCATAAGCTTTCCTTCTCCAGATTCAGTAGCAAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCAAAGCCTGTTTGCTATCAAGACCAAGTCCAAGCTGCGCATGGTGACAACAAAGCTCCTCCTTCTTTGACACATATCAAGAGCGAAATATCAGAACCACAAGCTCAGGATTCTGGGTACACATTACCCTCGCAATTGGATCAAAATCAGCAACACCAGCAGCAACAACCACAATATGTCCATGCTAGCACACACTACATTCCCCACCCTGCAGTTCCAGGTGCAGTGCCAATGTCATCCTACTACCCAGTTTATGCTCCATCTTCACAGCAACAAGTTCATCACCCAATTGGTCAGCAGTACCCAGTTTATGTGATGCCTGTTGGAGCTACACAAGCCTACAATATGACTCTGCAACCCAATATAGTTGCTGCTGACCCAAGTGTGATAGCCTCAGGAAGGGCAGTGGTGCCACAAAGTGCAGCTGCTGCCCCAGCAGCTTACAAGGATGGCACTCCACCTATTTACCCCACTAAGGCAGCCAATCCTGTGGCCTCGAGTGCAGCATTTGTTCAAATACCTTCCGGTCAATTTCAGCAACAGTATGTGGGCGTGCCTCAAATTCATCCTCCACCACAGTCCATTACTGTTGCTCCCCCTGCTACTAGtaattacaattttgaatATGTTGCATCTGCGCAAGACCAACCATACTACCCTCAGCAGCAAACTCCGACTCCGTTGCCTCCTCAGTACCAATCCATGACCCCAGCGGCAGCATTATCAGATGCTTCAAAACAACACCCTGCAGAGACTATTCAGCAGCAAAACAGAACTTCACAGCCAGtata 2114 0.4976 MDQKVHMLSPIPSHVDLVLPFRYCPQSHGFQSEQRDRITGVPPPMDPPPAAVPTLAAATNQVQVNHPDSLESSPRARIGETLADEPLPPVPGAKLRLMCSYGGHIMPRPHDKTLCYVGGDTRIVVVDRHSSRKDLCGRLSRSLLHGRPFTLKYQLPNEDLDNLITVSTDEDHENMIEEYDRITAASSLKPSRLRLFLFFNTPETAVTMGSLLDDAKSETWFVDALNNSGILDRVVSDSVAVGGLVNLDRVPASDSSNSLEAQAAESLGENNKQVKGVPDVHSLPESPMVLENSSSYGSSLSSPSMANLPPIRVRVEDNGSRLQQEQRPGIEEQFSQMTFATSGMKQEDGYGNSVVPPPPMPSIPSIVAVPSSESMVVGENTNRIISDDERSDKGAPAGWRKPPLPVQIVQPRTSGGFAGTISFPSPDSVASDSSIASANSFSKPVCYQDQVQAAHGDNKAPPSLTHIKSEISEPQAQDSGYTLPSQLDQNQQHQQQQPQYVHASTHYIPHPAVPGAVPMSSYYPVYAPSSQQQVHHPIGQQYPVYVMPVGATQAYNMTLQPNIVAADPSVIASGRAVVPQSAAAAPAAYKDGTPPIYPTKAANPVASSAAFVQIPSGQFQQQYVGVPQIHPPPQSITVAPPATSNYNFEYVASAQDQPYYPQQQTPTPLPPQYQSMTPAAALSDASKQHPAETIQQQNRTSQPV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00844 704 MobiDBLite consensus disorder prediction 674 704 - -
Bva04g00844 704 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 45 697 - -
Bva04g00844 704 MobiDBLite consensus disorder prediction 251 285 - -
Bva04g00844 704 SUPERFAMILY CAD & PB1 domains 110 208 - -
Bva04g00844 704 MobiDBLite consensus disorder prediction 659 704 - -
Bva04g00844 704 PANTHER OS05G0427100 PROTEIN-RELATED 45 697 - -
Bva04g00844 704 SMART PB1_new 109 200 IPR000270 GO:0005515
Bva04g00844 704 Gene3D - 112 199 - -
Bva04g00844 704 Pfam PB1 domain 111 198 IPR000270 GO:0005515
Bva04g00844 704 MobiDBLite consensus disorder prediction 251 269 - -
Bva04g00844 704 CDD PB1_UP2 98 198 - -
Bva04g00844 704 MobiDBLite consensus disorder prediction 472 501 - -
Bva04g00844 704 MobiDBLite consensus disorder prediction 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00844 Bva-Chr4 5543871 5547080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00844 94 227 MAP Kinase Kinase Kinase AT5G57610 44.118 6.15e-25 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00844 04 5543871 5547080 Bva03g00699 03 4174497 4176893 ECH
Bva03g01787 03 16033400 16035699 Bva04g00844 04 5543871 5547080 ECH
Bva04g00585 04 3841814 3845075 Bva04g00844 04 5543871 5547080 ECH
Bva01g01670 01 17851978 17854533 Bva04g00844 04 5543871 5547080 ECH
Bva04g00844 04 5543871 5547080 Bva04g00844 04 5543871 5547080 ECH