Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00813 ATGCCTCTAGCTCTTTCCAGCTCTTTttactctttctcttctcctcttccattttgctcttcAAGTTCTTTTAACTTTGTTGGCAGCTACCCCATAATCCAAAGGGATCAAGAACATGAGTATGTTTTTCctaatgatgaagaagaagcaacAGAAGAAGAGATATATGCTCATGTTGAGGCTGCTGATGAGAGAGATGATCTTGGTGGCAGACATCATTTGTGGTGGAGAAACCCTTTTTTAGTTACATTGTTCACATGCAACGCTAGTTACATTGTTCACTTTTGTGGAGAAGATCATGTTGTTGATGGAATCATTGAAAATAAGAAGCTGCAGCAGGAGGGAAAGCTGAGAGGGAATGAGAGATTCTTTGTTTTCACGCCAAACAGCCGGTTGGAGACTAACAAGTTGATTGTTGAAGAGaaggatgatgatgataaagaACTATATCGTGATTCATGCACTGTTGGGTCTAATCTAAGAGCTCCTCTGAATGGAGGAGCTCCATTACGGATTCTGAATCCATATGATGAACTGGAGGCTGCATATGTGGCACAAATTTACTTGACATGGGAGGCTCTTAATTGGAACTACAAGAATTTTCAATCCAAGAAATCTCTGGGCCGCGTTGTTGATGATGGTTATCCTGCCACCATTGGACAGCAATTCCAGCAGTTTCAAGTTTTGTTGCAGAGATACACAGAGAATGAGCCTTATGAGCATGGCAGGAGACCTGAGGTCTATGCTAGAATGAGGCTTTTGGCTCCAAAGTTGCTCTCAGTGCCAGAATACCGAGAGGAGGCAGCTCAGGCGTGCCTTTTCAAGATCTCTGGTCTCCAAGAgtgtgagagagaaaagatGAATCACTGTGGGTACCAGCAAAACGCCTTTGCCAGCTGCGAGATGGGGATGGAATCGATGGTTTGCCCTAAACCTCGTCGTTTGGGTCTGTTCAACCACTCCTCCATCAACGACAATATCAGACCCTTCAGATGGCCCATCAACTACCAATCGGAGATCGAAGATTCAGGGGTTGGGGAAGAGCTTCTGGACATCATTCGCCCCAAGGAAAGTTATGCAGGAAGATCAGGGAACCAAGTGGCTTCGTCTCCACCATTTTTCTGTGGATCTCCACCTAGTAGGGCTTCAAACCCTGTAATCCAAGATGAGCAATTTGGAAATGGGAATTTTAGTCCATTTTCTGTGGTGCCCTCTTCGCCATCCCCTTCAGCTCGAGGTTGTGTTTCAATGAAATTTGGGCAGAAACCAGCTGCAGTGAGGATCGAAGGTTTTGATTGCCTGAGCAGAGATAGACGCAACCGCAGCATTTCTGCTGTTGCATA 1343 0.4237 MPLALSSSFYSFSSPLPFCSSSSFNFVGSYPIIQRDQEHEYVFPNDEEEATEEEIYAHVEAADERDDLGGRHHLWWRNPFLVTLFTCNASYIVHFCGEDHVVDGIIENKKLQQEGKLRGNERFFVFTPNSRLETNKLIVEEKDDDDKELYRDSCTVGSNLRAPLNGGAPLRILNPYDELEAAYVAQIYLTWEALNWNYKNFQSKKSLGRVVDDGYPATIGQQFQQFQVLLQRYTENEPYEHGRRPEVYARMRLLAPKLLSVPEYREEAAQACLFKISGLQECEREKMNHCGYQQNAFASCEMGMESMVCPKPRRLGLFNHSSINDNIRPFRWPINYQSEIEDSGVGEELLDIIRPKESYAGRSGNQVASSPPFFCGSPPSRASNPVIQDEQFGNGNFSPFSVVPSSPSPSARGCVSMKFGQKPAAVRIEGFDCLSRDRRNRSISAVA 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00813 447 PANTHER DUF1666 FAMILY PROTEIN 174 267 - -
Bva04g00813 447 PANTHER DUF1666 FAMILY PROTEIN 97 159 - -
Bva04g00813 447 Pfam Protein of unknown function (DUF1666) 178 268 IPR012870 -
Bva04g00813 447 PANTHER DNA LIGASE (DUF1666)-RELATED 174 267 - -
Bva04g00813 447 PANTHER DNA LIGASE (DUF1666)-RELATED 97 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00813 Bva-Chr4 5368447 5373967 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01831 03 16506467 16508640 Bva04g00813 04 5368447 5373967 ECH
Bva04g00534 04 3496511 3498556 Bva04g00813 04 5368447 5373967 ECH
Bva01g01738 01 18283815 18286207 Bva04g00813 04 5368447 5373967 ECH
Bva11g00756 11 10443476 10445583 Bva04g00813 04 5368447 5373967 ECH
Bva04g00813 04 5368447 5373967 Bva04g00813 04 5368447 5373967 ECH