Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00587 ATGCTGGGGATCTTCACTGGGGCAGGTGTTCACTTTTCATCcattaattttcctttgataGACAGGAAGAATGAAAAGGATTTCAGGATGAGAGAAGTCCAGCTGGGTTCCCATACTGTGAAATCTCATGGATATACAGTTGCAAGAACACACATGCATGATTGGCTTATACTCATCCTCCTTGTTTTAATAGAGATTATCCTGTACATAATCCATCCTTTCTATCGCTTTGTTGGGAAGGATATGATGACTGATCTCAGATACCCCCTGAAGAGTAATTCAGTTCCTGTTTGGGCTGTTCCTGTGTATGCAGTTTTATTGCCTAtagttatctttctttttgtctattttcgAAGGAGAGATGTCTATGATCTTCATCATGCTGTACTAGGTCTCTTGTTCTCCGTTTTAGTAACAGCAGTAATTACTGATGCAATAAAAAATGCAGTAGGTCGACCTCAACCAGATTTCTTCTGGCGTTGTTTTCCAGATGGAAAGGATGTCTATGATCAACTGGGAAATGTCATATGCCATGGTGAGAAGAATGTTATCAAGGAAGGACATAAGAGTTTCCCAAGTGGCCACACTTCTTGGTCCTTCGCTGGTCTGGGATTCTTATCATTGTACTTGtcaggaaaaataaaagcgTTTGACCGTGCAGGCCACGTCGCAAAACTTTGCCTAGTTTTTCTCCCTCTACTTTTCGCATCTCTTGTTGGAATATCTCGTGTTGATGACTATTGGCACCACTGGGAGGATGTTTTTGCTGGAGGTCTTATAGGGCTCACAATCTCTACATTTTGCTATTTACAGTTTTTCCCTCCTCCTTATCATCCCGAAGGCTGGGGACCTTACGCATACTTTAGGTCGCTGGAGGAATCAAGTGCTGGTACACAAGCAGATAATGCTCAAGATACTTGCAATGTTCAGTCAACAGAGGCTCAGGTTAAGAACGAGGAAGGGCAAAGCTGCCATGGGTGTATAGGGTTCAGCATTGGATG 1001 0.4076 MLGIFTGAGVHFSSINFPLIDRKNEKDFRMREVQLGSHTVKSHGYTVARTHMHDWLILILLVLIEIILYIIHPFYRFVGKDMMTDLRYPLKSNSVPVWAVPVYAVLLPIVIFLFVYFRRRDVYDLHHAVLGLLFSVLVTAVITDAIKNAVGRPQPDFFWRCFPDGKDVYDQLGNVICHGEKNVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDRAGHVAKLCLVFLPLLFASLVGISRVDDYWHHWEDVFAGGLIGLTISTFCYLQFFPPPYHPEGWGPYAYFRSLEESSAGTQADNAQDTCNVQSTEAQVKNEEGQSCHGCIGFSIG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00587 333 Pfam PAP2 superfamily 129 273 IPR000326 -
Bva04g00587 333 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 49 279 IPR036938 -
Bva04g00587 333 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 23 320 - -
Bva04g00587 333 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 49 281 - -
Bva04g00587 333 SMART acid_phosph_2 129 269 IPR000326 -
Bva04g00587 333 CDD PAP2_containing_1_like 84 272 - -
Bva04g00587 333 PANTHER LIPID PHOSPHATE PHOSPHATASE 23 320 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00587 Bva-Chr4 3846945 3850259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00587 30 323 Lipid Metabolism Gene Families AT3G02600 77.211 1.51e-174 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00587 04 3846945 3850259 Bva04g00845 04 5548150 5554033 ECH
Bva04g00587 04 3846945 3850259 Bva03g00700 03 4180582 4184802 ECH
Bva04g00587 04 3846945 3850259 Bva04g00587 04 3846945 3850259 ECH
Bva03g01786 03 16027145 16031229 Bva04g00587 04 3846945 3850259 ECH
Bva01g01668 01 17834212 17838228 Bva04g00587 04 3846945 3850259 ECH
Bva11g00718 11 10168102 10168317 Bva04g00587 04 3846945 3850259 ECH