Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00585 ATGGAACCACGGCCAACATCACTGCCTTCCGCCACCGGAAACAGCGGGAAGCTCCGTCTCATGTGTAGATACGGCGGCAATATAATCCCTCGTCCCGGTTCCAAGTCTCTCTGCTACGTCGGCGGCGACACCCGCATCGTCGCTATTGACCCCGAAATTATAACCACCCTTTCCTCCTTTGTTGCTCATCTCTCTTCCACTCTCTCTATCAACTTCACCTTCGTTCTCAAGTACCAGCTTCCCCATCTGGACCTTTGCTCTCTCATATCCGTCACTTCCGATGACGATTTCCTCATCCTCATTGACGAGCACAACCACCTCTCATGTTCCCCTTCCTCTGCACCATCCCGCATCCGAGTATTTCTCTTCCCCTCGAAGCCCGATTCGGGATTGTGCCTCATTCGGCACCCTAAAAGTGAGACTTGGTTCTCCGATGCGCTTAACGGGGTTAAGATTCTTCAAAAGGGGCGCCATTCCATGATGGGTTTTGACGGCGAGGCTGGTTCTGGTGTTGAAGCTCACAACTTTCTCTCTTCTGGGCCTGAGTCGATGGTTCTGGAGACGAGTTCGTCTTTTGGGTCAACTTCTTCTTCGGCTTCCCTGAGTAATTTGCCTCCTTTGAGAGCTCAGGGTGAGGATAACGAGGTCAATTCGCAGGATGCTAAAGTGAAACTGATCCCTTCTGATGCGGTTCAAAGtgaTAGTAGTGTTTCAAATATTCTGTCCCACCATCAGAAAATAGTGTACCAAGACCCTGCTGTTCATGCTTCTTCAATGGAGACTATAGTTAATGCTGAATCCGTCAGTTTGGAAACTATGATCCCTAATATTTCCACGGGGCATGCTTCATTTTCACAATTGAATCAAGTGCAGAGGCAACCTGTGCAAATAGTACAAGTCGGTGGGGCGCATATTATACCTCATAATCCAAGTGGCATGGTGTTGGTACCTTCTTACTCGCAGATGTACCAGCCGCAACAGCCATTGCAGCATCTGGTTCATCATCATAATCAACCATACCCAATTTACCTTGTACCAATAGCGCAGATTCCACCCAACAATTTGCCTTCACATTTTGGTGTTACTGATTCTGCAACTGCTTCTAGCCAAGCTTCATGGCATCTAGTTCACAATTTTGAGGAGGCAGTGAAGCCTCCTCCCTTTGCTTCTGATATTTCCTCACAGAATTATGGAACAGCCAATGCAGCAACAGCTTATGTTCATGTAACAAACAATGGAAATCAGCAAGGAGAAGCAGATGTTCCTTCTGTATATCAGCATCCTCGGACCCATGCTATCGCTTCTGGGGAATCTCCTAAGCAAGGGAATGATCCTAATGATGACCATGCTCGACTCCAAATATACAAATCTCAGCCTCCACCACCCTCTTTGCCTTCTCAACACTA 1406 0.4765 MEPRPTSLPSATGNSGKLRLMCRYGGNIIPRPGSKSLCYVGGDTRIVAIDPEIITTLSSFVAHLSSTLSINFTFVLKYQLPHLDLCSLISVTSDDDFLILIDEHNHLSCSPSSAPSRIRVFLFPSKPDSGLCLIRHPKSETWFSDALNGVKILQKGRHSMMGFDGEAGSGVEAHNFLSSGPESMVLETSSSFGSTSSSASLSNLPPLRAQGEDNEVNSQDAKVKLIPSDAVQSDSSVSNILSHHQKIVYQDPAVHASSMETIVNAESVSLETMIPNISTGHASFSQLNQVQRQPVQIVQVGGAHIIPHNPSGMVLVPSYSQMYQPQQPLQHLVHHHNQPYPIYLVPIAQIPPNNLPSHFGVTDSATASSQASWHLVHNFEEAVKPPPFASDISSQNYGTANAATAYVHVTNNGNQQGEADVPSVYQHPRTHAIASGESPKQGNDPNDDHARLQIYKSQPPPPSLPSQH 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00585 468 MobiDBLite consensus disorder prediction 427 468 - -
Bva04g00585 468 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 467 - -
Bva04g00585 468 SMART PB1_new 32 125 IPR000270 GO:0005515
Bva04g00585 468 MobiDBLite consensus disorder prediction 187 215 - -
Bva04g00585 468 PANTHER OS05G0427100 PROTEIN-RELATED 1 467 - -
Bva04g00585 468 CDD PB1_UP2 21 123 - -
Bva04g00585 468 SUPERFAMILY CAD & PB1 domains 35 129 - -
Bva04g00585 468 Pfam PB1 domain 36 124 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00585 Bva-Chr4 3841814 3845075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00585 10 164 MAP Kinase Kinase Kinase AT1G79570 34.375 5.59e-20 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00585 04 3841814 3845075 Bva04g00844 04 5543871 5547080 ECH
Bva04g00585 04 3841814 3845075 Bva03g00699 03 4174497 4176893 ECH
Bva04g00585 04 3841814 3845075 Bva04g00585 04 3841814 3845075 ECH
Bva03g01787 03 16033400 16035699 Bva04g00585 04 3841814 3845075 ECH
Bva01g01670 01 17851978 17854533 Bva04g00585 04 3841814 3845075 ECH