Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g01770 ATGGAGGAGACTCTGTTGCCCAAGAAGAACACTGAAATCGCCAACAATGATAGGGTGGTATCATCGCAGAGTGGTGGTGGTTCATTCGTGGAGCAGCTGAAGACGGTGAGCTTCATGGCGGTGCCAATGGTGGCGGTGACGGTGTCTCAGTTCCTTCTGCAGGTTGTGTCGCTGATGATGGTGGGGCATCTCGACCAGCTTTCTCTTTCTGGTGTTGCTCTTGCTACCTCTTTTGCAGATGTCACCGGCTTCAGCGTTCTTATGGGAATGGCAGGTGCATTGGAGACTCTATGTGGCCAAACCTTTGGAGCTGAGCAATTTCACAAGCTTGGAAGCTACACTTTCTGTGCAATGATCTCTCTCATTTCAGCTTGTTTCCCAATATCTCTCATATGGCTATTCATGGACAAAATACTAGTTCTTTTTGGCCAAGACCCTTCAATTTCACTAGTGGCTGGCAATTACTGCATTTGGCTTATTCCTTCACTGTTTGGCTATGCTGTTCTTCAAGCATTTATTCGCTATTTCCAGACTCAGAGTTTGATCTTTCCAATGCTATGGAGCTCAGCTTTGGCACTAGTTCTGCACATACCTATTTGCTGGGCGCTGGTGTTCAAACTGGGGTTAGGAAATGGTGGAGCAGCCATAGCCATTGGGATTTCATATTGGTTGAATGTGATAGTGCTTGCAATTTACATGAAGCATGCTCCAGCGTGTGAGAAAACGCAGATAGTGTTGGGGAGAAGTTCTTTATCTACCATTAAAGAGTTCTTCCGCTTAGCTATTCCTTCTGCACTGATGGTTTGTTTTGAATGGTGGTCATTTGAGCTACTGGTAATACTTGGTGGGCTTTTACCAAATCCGCAGCTTGAAACTTCAGTTCTTTCCAtctgTCTTAACACTTGTACATTACACTATTTCGTTCCTTATGGGGTTGGTGCTGCTGCAAGCACTCGGGTTTCGAATGAATTAGGAGCAGGTGAAGCACAAGCTGCACAAAATGCAGTTCGAGCTGTTATGGTTCTCGCATTCTCAGAAGCAATTGTTGTTAGCTCTGCACTGTTTTCGTGCCGTTATATTTTAGGATATGCATTTAGCAATGAGAAGGAAGTTGTGGACTATGTCGCAAACATTGTTCCTCTGCTCTGTCTCTCTGTTAGTGTGGATAGTTTACTAGGAGTTCTCTCTGGTGTTGCCAGAGGCAGTGGGTGGCAGAACGTAGGAGCCTATGTCAATCTTGGAGCATATTATGTTGTAGGAATCCCAGTGGCTCTATTGTTGGGATTTGTTCTGCATTTAAGGGGGAAAGGACTATGGATTGGAATACTAACAGGCTCTACTTTACAAACAATTGTACTTGCTTTTATAACGGCATTTACAAACTGGGAGAAACAGGCGTCCTTGGCAAGGGAAAGAATATTTGAAGAGGGTGCATTTCAAGGTCATAATGGATTGgtttg 1460 0.4438 MEETLLPKKNTEIANNDRVVSSQSGGGSFVEQLKTVSFMAVPMVAVTVSQFLLQVVSLMMVGHLDQLSLSGVALATSFADVTGFSVLMGMAGALETLCGQTFGAEQFHKLGSYTFCAMISLISACFPISLIWLFMDKILVLFGQDPSISLVAGNYCIWLIPSLFGYAVLQAFIRYFQTQSLIFPMLWSSALALVLHIPICWALVFKLGLGNGGAAIAIGISYWLNVIVLAIYMKHAPACEKTQIVLGRSSLSTIKEFFRLAIPSALMVCFEWWSFELLVILGGLLPNPQLETSVLSICLNTCTLHYFVPYGVGAAASTRVSNELGAGEAQAAQNAVRAVMVLAFSEAIVVSSALFSCRYILGYAFSNEKEVVDYVANIVPLLCLSVSVDSLLGVLSGVARGSGWQNVGAYVNLGAYYVVGIPVALLLGFVLHLRGKGLWIGILTGSTLQTIVLAFITAFTNWEKQASLARERIFEEGAFQGHNGLV 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g01770 486 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 472 - -
Bva03g01770 486 CDD MATE_eukaryotic 32 467 IPR045069 GO:0042910|GO:1990961
Bva03g01770 486 PANTHER PROTEIN DETOXIFICATION 7-RELATED 27 472 - -
Bva03g01770 486 TIGRFAM matE: MATE efflux family protein 42 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01770 486 Pfam MatE 263 425 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g01770 486 Pfam MatE 42 201 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g01770 Bva-Chr3 15882728 15889609 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g00713 03 4263666 4266710 Bva03g01770 03 15882728 15889609 BWGD
Bva03g01770 03 15882728 15889609 Bva03g01770 03 15882728 15889609 ECH