Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g00711 ATGGAGAGAGAAGACCAAAAGGATTCTCTACGTTCTTCATTGATTCAATTCGTAGGGGAAGAAGGGAAAGTTGATTCAGAGCAACACAAGGAAAGAAGAGAGTTTTTTGAAGAAGTTAAAAGGCAGCTATGGCTAGCAGGACCGCTTATATCTGTGAATCTGTTAAATTTTTGTCAACAAGTTATATCTGTCATGTTTGTGGGGCATCTTGGCGAGTTGCCTCTCTCTGGTGCTTCCATGGCTACTTCTTTTGCAGCAGTCACTGGCTTTAGCTTACTTTTAGGAATGGCAAGTGCATTGGATACTTTATGTGGACAATCATATGGAGCAAAGCAGCACCAGATGCTAGGCATGCACATGCAGAGAGCCATGATTGTTCTTTTGATTGTCAGCATTCCCCTTGCAGTTATTTGGGCAAACACAAGATCCATTCTAATGGCCTTTGGCCAAGATCCGGATATTGCCACAGAAGCCGGAGAGTATGCTTTTTACCTGATTCCATGCATTTTTGGCTATGCTCTTCTTCAATGCTTGAACAGATTCTTACAAACCCAAAATATTGTATCTCCAATGATGTTTAGCTCTGGATTTACAACTTTACTACATATTCTTATATGTTGGATTATGGTATACAAAACTGGATTAGGCAACAAAGGAGCTGCCTTGGCAAATTCTGTATCTTACTGGGTTAATGTTATAATACTGGCACTCTATGTCAAGTTTTCTCCTTCATGTGCAAACACATGGACAGGCTTTACGAAAGAGTCGTTGAAGGACATCCCCTCTTTTCTGAGACTGGCCATTCCTTCAGCTGTTATGGTTTGCTTGGAAATGTGGTCATTTGAATTAATGGTTCTCCTATCTGGTCTTCTTCCAAATCCAAAGTTGGAAACCTCAGTGCTTTCTATCAGCCTCAATACTGCAGCAATTGTCTGGATGATCCCTTTTGGACTCAGTGGTGCTGTGAGTGTTCGCGTCTCAAATGAATTAGGAGCTGCTCATCCACGGGCTGCACGATTAGCAGCGTGTGTTGTCTTGGTAATGGCCATCATTGAGGGAATCTTAGTTGGAGCAGCGATGATACTAATACGCAGTGTTTGGGGCTATGCTTATAGCAATGAGGTAGAAGTGGTCAGATATGTAGCAATCATGTTGCCGATTCTTGCAGTATCCAATTTCCTGGATGGAATCCAGACTGTTCTCTCAGGCACGTTTAGAGGATGTGGTTGGCAGAAAATGGGTGCTTTTGTTAACCTAGGAGCGTACTATTTGGTTGGGATTCCATCAGCTGCCTTATTAGCTTTTGTCTTGCACATTGGTGGCAagGGGCTTTGGCTGGGAATCATATGTGCACTCCTTGTTCAAGTGGCATGTCTACTTACCATTACAATACGTACTGATTGGGAGAAAGAGgtAAGGAATGCTAAAGAAAGAGTCTATGATTCAATGACACCCGAAGGCATAATATCATG 1472 0.4232 MEREDQKDSLRSSLIQFVGEEGKVDSEQHKERREFFEEVKRQLWLAGPLISVNLLNFCQQVISVMFVGHLGELPLSGASMATSFAAVTGFSLLLGMASALDTLCGQSYGAKQHQMLGMHMQRAMIVLLIVSIPLAVIWANTRSILMAFGQDPDIATEAGEYAFYLIPCIFGYALLQCLNRFLQTQNIVSPMMFSSGFTTLLHILICWIMVYKTGLGNKGAALANSVSYWVNVIILALYVKFSPSCANTWTGFTKESLKDIPSFLRLAIPSAVMVCLEMWSFELMVLLSGLLPNPKLETSVLSISLNTAAIVWMIPFGLSGAVSVRVSNELGAAHPRAARLAACVVLVMAIIEGILVGAAMILIRSVWGYAYSNEVEVVRYVAIMLPILAVSNFLDGIQTVLSGTFRGCGWQKMGAFVNLGAYYLVGIPSAALLAFVLHIGGKGLWLGIICALLVQVACLLTITIRTDWEKEVRNAKERVYDSMTPEGIIS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g00711 490 Pfam MatE 269 430 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g00711 490 Pfam MatE 48 208 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva03g00711 490 CDD MATE_eukaryotic 38 474 IPR045069 GO:0042910|GO:1990961
Bva03g00711 490 PANTHER PROTEIN DETOXIFICATION 20 478 - -
Bva03g00711 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 478 - -
Bva03g00711 490 TIGRFAM matE: MATE efflux family protein 48 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g00711 Bva-Chr3 4255462 4258244 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01650 01 17678344 17682770 Bva03g00711 03 4255462 4258244 ECH
Bva11g00694 11 10021052 10024285 Bva03g00711 03 4255462 4258244 ECH
Bva03g00711 03 4255462 4258244 Bva03g00711 03 4255462 4258244 ECH