Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva03g00700 | ATGCCAGAACTGAAGTCAGGTTGCTACACGATAAAGTCACATGGAAGcaaggtgattagggcacaTAAGCTTGATTGGCTGATTCTTCTACTTCTTGTGGCTATAGAATTATTATTGGATGGCATGGAACCTTTTCACCGCTATGTGGGGGAAGAAATGATGACAGATCTGAAATACCCTTATAAACAGGAAACTGTTCCCTTTTTGGCTGCTCAAGTAATGTCTGTATTGTTTCCCATTGTTATCTTTATTATGTTCTATATATGCCAAAGGGATGTATACGATTTACACCATGCAACAAAGGGTGTTCTTTTCTCTGCTCTTGTAACTGCAGTTATCACAGATTCAATTAAAGCTGCTGTTGGTCGACCTCGACCAAGCTTCTTCTGGCGGTGTTTCCCTGATGGTAAAGCGGTTTTTGATGCCATCACAAAAGATGTTGTCTGTCATGGGGATAAAAAGGTAATAAGGGAAGGGTACAGAAGTTTTCCAAGTGGCCACACTTCTTGGTCCTTTGCTGGTCTTGGTTTTCTTGCATGGTATTTATCAGGAAAGACAAGGTTATTTGATCGAAGGGGCCATATTGGCAAACTCTGTATTGTGTTGCTTCCTTTACTACTTGCTGGTCTTGTGGGAATTTCGCGGGTTGATGACTACAGGCATCATTGGCAGGATGTGCTGACCGGAGGTCTAATAGGCATGATTGTGTCTTCGATCTGCTACTTATTAGTGTTTCCTTTTCCTCATCAACCAGGTGGTTGGGCGCCTTATGCTTATTTTGAAATGTCGGGTGAAGTAGAAGGATCACGCTATCTTTATACGCGACAACCAGAAGTTTA | 839 | 0.4112 | MPELKSGCYTIKSHGSKVIRAHKLDWLILLLLVAIELLLDGMEPFHRYVGEEMMTDLKYPYKQETVPFLAAQVMSVLFPIVIFIMFYICQRDVYDLHHATKGVLFSALVTAVITDSIKAAVGRPRPSFFWRCFPDGKAVFDAITKDVVCHGDKKVIREGYRSFPSGHTSWSFAGLGFLAWYLSGKTRLFDRRGHIGKLCIVLLPLLLAGLVGISRVDDYRHHWQDVLTGGLIGMIVSSICYLLVFPFPHQPGGWAPYAYFEMSGEVEGSRYLYTRQPEV | 279 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva03g00700 | 279 | SUPERFAMILY | Acid phosphatase/Vanadium-dependent haloperoxidase | 21 | 250 | IPR036938 | - | |
| Bva03g00700 | 279 | Pfam | PAP2 superfamily | 102 | 245 | IPR000326 | - | |
| Bva03g00700 | 279 | SMART | acid_phosph_2 | 100 | 241 | IPR000326 | - | |
| Bva03g00700 | 279 | Gene3D | Phosphatidic acid phosphatase type 2/haloperoxidase | 18 | 252 | - | - | |
| Bva03g00700 | 279 | CDD | PAP2_containing_1_like | 55 | 241 | - | - | |
| Bva03g00700 | 279 | PANTHER | LIPID PHOSPHATE PHOSPHATASE 4-RELATED | 1 | 265 | - | - | |
| Bva03g00700 | 279 | PANTHER | LIPID PHOSPHATE PHOSPHATASE | 1 | 265 | IPR043216 | GO:0006644 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva03g00700 | Bva-Chr3 | 4180582 | 4184802 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva03g00700 | 1 | 277 | Lipid Metabolism Gene Families | AT3G02600 | 60.573 | 3.75e-124 | 355 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva04g00845 | 04 | 5548150 | 5554033 | Bva03g00700 | 03 | 4180582 | 4184802 | ECH | |
| Bva03g01786 | 03 | 16027145 | 16031229 | Bva03g00700 | 03 | 4180582 | 4184802 | ECH | |
| Bva04g00587 | 04 | 3846945 | 3850259 | Bva03g00700 | 03 | 4180582 | 4184802 | ECH | |
| Bva01g01668 | 01 | 17834212 | 17838228 | Bva03g00700 | 03 | 4180582 | 4184802 | ECH | |
| Bva11g00718 | 11 | 10168102 | 10168317 | Bva03g00700 | 03 | 4180582 | 4184802 | ECH | |
| Bva03g00700 | 03 | 4180582 | 4184802 | Bva03g00700 | 03 | 4180582 | 4184802 | ECH |